Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU424152 |
| length | 200 |
| lncRNA type | sense_over |
| GC content | 0.53 |
| exon number | 2 |
| gene id | LOC110522812 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17019587 ~ 17071539 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU424150 | lncRNA | upstream | 301 | 17045014 ~ 17045237 (+) | True | G373073 |
| TU424144 | lncRNA | upstream | 8174 | 17035358 ~ 17037364 (+) | True | G373068 |
| TU423699 | lncRNA | upstream | 28935 | 17016400 ~ 17016603 (+) | True | G372685 |
| TU423698 | lncRNA | upstream | 40469 | 17004384 ~ 17005069 (+) | True | G372684 |
| TU423696 | lncRNA | upstream | 47077 | 16997016 ~ 16998461 (+) | True | G372683 |
| TU424169 | lncRNA | downstream | 23180 | 17069181 ~ 17069425 (+) | True | G373090 |
| TU424154 | lncRNA | downstream | 25631 | 17071632 ~ 17110493 (+) | True | G373075 |
| TU424199 | lncRNA | downstream | 66457 | 17112458 ~ 17112673 (+) | True | G373109 |
| TU424215 | lncRNA | downstream | 103055 | 17149056 ~ 17149268 (+) | True | G373125 |
| TU424218 | lncRNA | downstream | 105944 | 17151945 ~ 17152244 (+) | True | G373128 |
| XM_021601962.2 | mRNA | upstream | 33527 | 16995394 ~ 17012011 (+) | False | st8sia5 |
| XM_021601963.2 | mRNA | upstream | 33527 | 16995396 ~ 17012011 (+) | True | st8sia5 |
| XM_021601959.2 | mRNA | upstream | 77729 | 16949402 ~ 16967809 (+) | True | LOC110523342 |
| XM_021601952.2 | mRNA | upstream | 301471 | 16741353 ~ 16744067 (+) | True | purbb |
| XM_036976947.1 | mRNA | upstream | 310409 | 16732636 ~ 16735129 (+) | True | ved |
| XM_021601970.2 | mRNA | downstream | 73786 | 17119787 ~ 17125777 (+) | True | atp5fa1 |
| XM_021601254.2 | mRNA | downstream | 80355 | 17126356 ~ 17147778 (+) | False | LOC100136246 |
| NM_001124510.1 | mRNA | downstream | 85709 | 17131710 ~ 17147778 (+) | True | LOC100136246 |
| XM_021601976.2 | mRNA | downstream | 145415 | 17191416 ~ 17217186 (+) | False | LOC110523352 |
| XM_021601977.2 | mRNA | downstream | 145415 | 17191416 ~ 17217186 (+) | False | LOC110523352 |
| TU423600 | other | upstream | 163353 | 16870434 ~ 16882185 (+) | False | G372618 |
| TU423601 | other | upstream | 163353 | 16870434 ~ 16882185 (+) | True | G372618 |
| TU423245 | other | upstream | 307038 | 16735642 ~ 16738500 (+) | True | G372373 |
| TU423147 | other | upstream | 824605 | 16219606 ~ 16220933 (+) | True | G372281 |
| TU422347 | other | upstream | 1250416 | 15791559 ~ 15795122 (+) | False | G371615 |
| TU424889 | other | downstream | 658112 | 17704113 ~ 17707757 (+) | True | G373726 |
| TU425343 | other | downstream | 1021442 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU427802 | other | downstream | 2937260 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU428545 | other | downstream | 3545479 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU428462 | other | downstream | 3697583 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
