Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU434663 |
| length | 789 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC110523494 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 25528909 ~ 25561013 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU434654 | lncRNA | upstream | 78119 | 25457260 ~ 25457661 (+) | True | G382504 |
| TU434647 | lncRNA | upstream | 82686 | 25452872 ~ 25453094 (+) | True | G382497 |
| TU434625 | lncRNA | upstream | 86210 | 25442759 ~ 25449570 (+) | True | G382478 |
| TU434623 | lncRNA | upstream | 99973 | 25435538 ~ 25435807 (+) | True | G382476 |
| TU434477 | lncRNA | upstream | 197445 | 25338105 ~ 25338335 (+) | True | G382341 |
| TU434757 | lncRNA | downstream | 83868 | 25624113 ~ 25624865 (+) | True | G382598 |
| TU434832 | lncRNA | downstream | 235355 | 25775600 ~ 25775817 (+) | True | G382670 |
| TU434835 | lncRNA | downstream | 242151 | 25782396 ~ 25782611 (+) | True | G382673 |
| TU434815 | lncRNA | downstream | 252539 | 25792784 ~ 25793763 (+) | True | cacna1b |
| TU434814 | lncRNA | downstream | 253856 | 25794101 ~ 25795410 (+) | True | G382652 |
| XM_021602232.2 | mRNA | upstream | 52991 | 25473913 ~ 25482789 (+) | True | LOC110523493 |
| XM_021602226.2 | mRNA | upstream | 111554 | 25419705 ~ 25424226 (+) | True | aqp3b |
| trnaa-ugc-10 | mRNA | upstream | 816349 | 24719360 ~ 24719431 (+) | True | trnaa-ugc-10 |
| trnaa-ugc-9 | mRNA | upstream | 830994 | 24704715 ~ 24704786 (+) | True | trnaa-ugc-9 |
| XM_021602216.2 | mRNA | upstream | 891768 | 24635703 ~ 24644012 (+) | True | LOC110523483 |
| NM_001124629.1 | mRNA | downstream | 132655 | 25672900 ~ 25792999 (+) | False | cacna1b |
| XM_036977140.1 | mRNA | downstream | 329498 | 25869743 ~ 25938520 (+) | True | LOC110523500 |
| XM_021601319.2 | mRNA | downstream | 411849 | 25952094 ~ 25955508 (+) | True | LOC110522854 |
| XM_021602252.2 | mRNA | downstream | 455403 | 25995648 ~ 26149621 (+) | True | whrna |
| XR_005051693.1 | mRNA | downstream | 621838 | 26162083 ~ 26166903 (+) | True | LOC118964579 |
| TU434321 | other | upstream | 310050 | 25225442 ~ 25225730 (+) | True | G382186 |
| TU433317 | other | upstream | 759351 | 24687739 ~ 24776429 (+) | True | G381239 |
| TU432381 | other | upstream | 1691435 | 23838524 ~ 23844345 (+) | False | LOC110523468 |
| TU432383 | other | upstream | 1691934 | 23838524 ~ 23843846 (+) | True | LOC110523468 |
| TU432380 | other | upstream | 1693064 | 23838524 ~ 23842716 (+) | False | LOC110523468 |
| TU434985 | other | downstream | 634700 | 26174945 ~ 26186690 (+) | True | LOC110523503 |
| TU435241 | other | downstream | 897374 | 26437619 ~ 26460696 (+) | False | LOC110522865 |
| TU435244 | other | downstream | 897414 | 26437659 ~ 26460535 (+) | True | LOC110522865 |
| TU436048 | other | downstream | 1121593 | 26661838 ~ 26663613 (+) | True | G383794 |
| TU437362 | other | downstream | 2135107 | 27675352 ~ 27683393 (+) | True | LOC110522888 |
