RNA id: XM_021603252.2


Basic Information

Item Value
RNA id XM_021603252.2
length 5833
RNA type mRNA
GC content 0.52
exon number 29
gene id kif14
representative False

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 50987889 ~ 51039285 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCGTGGAAATACTGCTATCTACCTTTCAAACACAGGCTCTGCATGTATTTTGTTCTGCTGTGGACGGTGACGTAATTTGTGTCTAGCCAATAGCACACCACTGATAGGAGTTTGAAATCGACGCGGGGCAGATGTCAACCACTACAGTGAAATGGGGAAGATGTGCACTTTCATTGATTTGTCTACAGATAACGTTGGTAACATTTTTCTTTTGGAATTGACGAAAGATTGTAatacatttattattattttttaaataaactcAGCCATGTCTTTATATTCGACATCAGCGAAAAAGCACACCGCCTTTTATGACAATTTCTTGACATCAAGGGTTCCTGACACGAAAGACCAAAAAGCTGCGCGAGGAATGATCAAAGGGGACGATACGAAATTATTGACATTGGATAAAACCAAGGAGATAAACACGACCTATTTGAACTCTGCACTCTCAAAAACCGGAGGTCAGAGGAATGGCACCCCCGGTCGAGGTCGTCTCACTCTACAGAGGAAAACCGGTACGAACGGCGACACTGTGATGAGTGAAAATACAATGGAAATCACTCAGAATAGGACACCGGTACCCGAGAAAAGACTCACGTTGCAACGCAGAACCAGGACAGGTTCAATTGACAAAAGCGCAAGTAATGACACCAGCAAAGCAACAGAGAGCTCGAGACAACACTGGGTCAGCGGCACCGACTCTCATCATTACAAAGTTCTCTCTGAATCAAACCCTAGAACGCCTGTTAGTGCAGTTGTATTGCGGTCATTCAGTCTGAGGGACAGCTCATCTAGAAGTAAATCAAGAGAAGCTGTTCATCTTTTAAACACTCCTTCTAAAGGAGTCAAACTATTTGCACCAAAACAGCCAGCAGCCCCGGGTAAAGTAGATGTGACAAAACCTGAGGATCATAGCAGAACTTTTTCAACACCCACAAAAATGACTCCATTCGAGAAAATCACAGCAAAGAAGGATGCCTTTGAGAGGTTGGCTGGGAAAGAGATCCCAAAAGTGGTGGCAGTAAAAACGGTAGGCCTAGAGAGGCCGAAGACACACGCACAGGTGACTGTGGAAGCTGCAAAGCCTGTTGCAACTCCCCATACTAACAAGTTTCTGGTCAGTAGTCAAAGAGCAAACGTGACCTCCAATTTGATGCCCGGGCAGGTGAGAAAGTACTCAACCCATGGCGACCTGACCATGGCTAGGTCCTCGACTCCTGCGCCTACCTTCTCCACCGAGCTTTTACTCCCACCCAGTGCGATGCTAAAGCACGAACAGGGTACCCTGAAAATGGAGAACAGTGCCGTGACAGTTGCGGTTAGAATGAGGCCATTCAACACCAGGGAGAAGACTGAGAAAGCATTGCAGGTGATCTTCATGGATAACCAGGAGACTCTTGTCCAACATCCAGACACCAAGCAGAGCTACTCCTTCACGTATGACTTCTCCTTCTGTTCCGTCGACAAAAGCGACCCCGGCTTTGCCAGCCAGCAGACGGTGTATGAAAAACTAGCAAAGCCACTTCTGGAGAGGGCCTTTGAGGGCTTCAACACCTGTCTGTTTGCATATGGCCAAACTGGATCTGGGAAGTCTTACACTATGATGGGTGTTGGGGAAGAAGCAGGTGTAACACCAAGATTCTGCGAGGAGCTCTTCTCTAGGCTGTCTGTGGTTGATAATCAGGAGGTTACATGTCATCTGGAGATGAGCTACTTTGAGGTGTACAATGAGAAAATCCATGACCTGCTCATTGCCAGGAATGAACAAAACCAAAAGAGGTGGCCTTTAAGGGTGAGGGAACATCCAGTCAACGGGCCTTACGTTGCTGAGCTGACAACAAACGTGGTGAGCTCCTATGCAGACATTCAGGGTTGGCTGGAGCTTGGGAACAAGCAGCGAGCCACTGCAGCCACGGGCATGAACGACAAGAGCTCCCGATCCCACTCCGTATTTACTCTGGTTATGACACAGACCAAGACTGAGTTTGTGGAAGGGGAAGAACATGACCACAGGATCACCAGCAGGATCAACCTGGTGGACTTGGCCGGCAGCGAACGCTGCTCCTCAGCCCAGACCAGCGGAGACCGCCTCAGGGAGGGTGCCAGCATCAACAAGTCGCTGCTGACCCTGGGGAAGGTGATCTCTGCCTtgtcagagcaggcccagacCAAGAGGAAGGTCTTCACTCCCTATAGGGACTCTGTGCTCACATGGCTGCTGAAGGAGAGCCTGGGTGGAAACTCCAAGACTGCCATGATCGCCACCCTGAGCCCGGCGGGCAGCAATGTGGAGGAGAGTTTGAGCACGCTGCGGTACGCCAAGCAGGCCCGCATGATCATCAACGTGGCCAAGGTCAACGAGGACACCAACGCCAAGCTCATAAGAGAGCTGAAAGCTGAGGTGGAGAAGCTGCGGGCTGCTCAAATGAGCTCTCAGGGCATCGAGCCGGAGAAAATGAACCTCTTCCAGCAGGAGATCTTAGCTCTGAAGAGCCAGCTAACCCAGCAGGAGAGGGAGATGGCCGAGGCCCACAGAGCGTGGAGAGAGAAGCTGGAGCAGGCAGAGAAACGCAAACGTAAGGAAACCAAAGAATTACAGaaAGAGGGCATCACGTTTAAGGTGGACAACCGGCTGCCCAACCTGGTAAACCTGAACGAGGACCCGCAGCTGTCAGAGATGCTGTTATACATGATTAAGGAGGGACAGACCAAGGTCGGCCAGCACAAGTCAGAGTCCGCCCACGACATCCAGCTGTCTGGGGCCCTTATCGCAGACGACCACTGTGTAATTTCCAATGTGAATGGTGAAGTCAGCATCATCCCCATAGAAAACGCCAAGACCTTTGTCAACGGGAACCTGGTATCTGAGACCACTGTCCTGCATCATGGTGACAGGGTGATCCTGGGCGGCGACCATTACTTCCGCTTCAACCACCCGGCAGAGGTGCAGTCTGGGAAACGCGTGTCATGCTGGACGGGCGACGGCGATGGCCATAAGgactttgagtttgccaaaaatGAGCTGCTCTCCGGGCAAAGAGCGCAACTGGAAGAGGAGATCGAGGAGGCCAGGCTAAAGGCCAAAGAGGAGATGATGCAGGGGATCCAGGTGGCCAAAGAGATGGCCCAGAAGGAGCTGTCTGACCAGAAGACTCAGTATGAGAACAGGATCAAAGCCCTGGAGAGAGAACTGGAGGAGGAGAGCGAAAGGAAGCGGTGTCAAGAGATGGACCAGCAGCGGGTGGTCTCCAAGATGGAGGAGCTGCAGTTTGCCAAGGTGGAGCTGGAGCAAGAAGTGGACACGCACAAGACACGTCTCCGCCTCCACATGGAGGCCCAGGCCACACGGCAGGCCATGGCCGATCACGGTGTCCGACAGGCCAAGGTGGTGGAGGCCCTCGAGGCAGAGAAGAGGAAGATCGGCAAAGACCTTGAGGAGATGCAAAGGAAAGTGGCACAGAAAGGAAGCCAGACTCTGAAAAACGTCCCTCCACAGTGGGACGCCATGAAGTTGTCTCTGATGATCGAGGAAGCCAACAAGATCAGTGGCAAACTCATGAAGAACACAGTTTTCAGCAGACACGAGGGGTCTGGGAAGGAGGgcggagggggaaagggagagctgCAGGTCCAGGTGCAGAACACCAAACTGGGCATCTCCACCTTCTGGAGTCTGGAGAAATTCCAGAGCAACCTGGCTGCCATGAGGGAACTCGACCAGGGGGACAGCAGCGCCTGTAAAGATGACGACGTGTTTTACGACCCCAATGATGAGTGGGAGCAAGATATATCGGCTTCCTCAACCGCCTCCTCCTTCTCACGCAGAAGGAGCAGAAGCCTGTTGAAGAGCAGGAGGATTTCAGGGCGTCTCTACGAAATCCGAGTGCACCCTATTCAAAGCCTTCATAACAGTAACACCTCACAGTCCTCTgGTCTGATCGGTGTGGCCAAAACGCCCTCGCTGCACCCCAGCTCATTAGATTCCACCCTGCCGGGGATCTGCAAAGATTTGATTGGCCAGATGGTGGGGCAGCTGCGCGGGTGTCACAGCTACGAGGAGAGCATGGCAGACAGGCTGAGCTCTGACCTCTACTGTGTGTACACAGCCGTGACGACCATCTCCGGCCTGTACGATGGCCTGGACGATGACTGTCAGGAGAGTGtgttTGTGTTAGAGGCTGAGGCTCCGACACAGCTGGTGAAGGCCACCTCGGCCATTGAGAGAGCCGTGTTTATCACCATGCAGTGGGTGGCCAGCGTCAAACCCAGAGCCGGACCCCTCTACACCGTCGCAGAGGAGCTCAAGACCCAAGTCAAGAGAATGGGTGGTTACTTTCAGCTTCTCATCCAGGGCTGTGACTCTGAGATCTCGTCCATGGTGACCGAGGCCCACAGGAAGAGTGGTCAGTGTCTGGACACGGCACTGCTGGTCATCAGTCACCTGGCCGCGCTTACCGCCACCCAGCTCCATTTGACCGAGCTGGGCTCTGAGGCCACAGGCAAGCAGTCTGTGGCCCTGTCTCTTTTGGAGGGGACTTGTAAAGGGGTGCACTCTCTCCTGGAAGAGGGTCTGGCAATCTCCAACAAGATGCTCAGCGATGCGCAGCTGGCCTATCCCAGGACTCCGGTTTTGCAGAGCCTCAAGTCGAAGATGCTGGACCTGTCCTGTGCTCTCCAGAGCTACATCCACTGCCACATGACGgaTAGGGAAGAAGGCTCCAAGAAGGGAGCTGAGGACCCTGATCCCTCACTGCTCCACAGAGTGAGGAACACAGCAGCCAAGCTTTTCCAGCTCAACCAGGCAATCAAGCAGCTTcacgctgctctctctctcgccctccgagGTAAAAGCAGTGACTCCAGCCTCAGTACCTGCCGAGaggctgtctcctcctcctccaagaCCATCGACAAAGTCATTAACGGCCTCCCCAGGGGCGGCACAGGGCTGGCTACCACATCATCTAGTCTACAGCTGCCCTGCCTGGAGACTGTCATAGCAGCCCGGGACGAGCTCCATTCTGCCCTGCAGTCCCTGAGTACCGCCTTCAACACGCAGGGCCTTGAAGAGAAGAGGGGATCTTCTGGCTCAGAGAAGAGCACACGGGAAAGGGGTCAGGGGAATGAGGGGACCCTGGTTGCTTCCGACATGGAAAGGAACAGAGGAGCCCCTAcgattgtttctctctcttcaggATTGTCTTCATCTAATGACGATGCACATTGGGTTTGATGCACAGGGGGTTGATCAGCTGATCAGGTACTTGTTCAGTAGGCATGAAACTGCCGGAAATGGGAAGGTAGTACAATCTGAGCTTGTCCAATGAGGAACAAATGTTTTCGGTTTCCGTTGCAATtttttttgctacagtgtgctctaatgaacatgacccagatgATTGATGTTAAAGGTTACAGGCTCAATGCCATTAATAGAAAGACCCAACAGAGAGAATGAATGTGCATCAAAGGTCTTTCTGTCCAATTGCACTAAAACCCCAGatgaatacactgaacaaaaatataatgtaaacgcaacatacaacaatttcaaagattttactcagttacagttcatataaggaaagccgtcaattgaaatacattcattaggccctaatctatggatttctcatgactgggaataaagatatgcatcAGTTGATCACATACCATAAAAAAGTAGGAACGTGGATCATAAAcccagttagtatctggtgtgaccaccatttgcctcatgtcatactcttcaatggctgtgcgacaTTGCTcgatattggcgggaactagaACACTTGTAcaggtcgatccagagcatcccaaacatgct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU467183 lncRNA downstream 162493 50824522 ~ 50825396 (-) True G412012
TU467083 lncRNA downstream 266667 50720788 ~ 50721222 (-) True G411927
TU466663 lncRNA downstream 307260 50680378 ~ 50680629 (-) True G411543
TU466662 lncRNA downstream 307770 50679546 ~ 50680119 (-) True G411542
TU466661 lncRNA downstream 308490 50679121 ~ 50679399 (-) True G411541
TU467355 lncRNA upstream 5718 51045003 ~ 51045210 (-) True G412181
TU467358 lncRNA upstream 9277 51048562 ~ 51048779 (-) True G412184
TU467415 lncRNA upstream 100314 51139599 ~ 51149659 (-) True G412240
TU467430 lncRNA upstream 140473 51179758 ~ 51228505 (-) True LOC110524003
TU467475 lncRNA upstream 224164 51263449 ~ 51263702 (-) True G412295
XM_021603243.2 mRNA downstream 79 50825609 ~ 50987810 (-) False LOC110523998
XM_021603244.2 mRNA downstream 79 50825609 ~ 50987810 (-) False LOC110523998
XM_021603245.2 mRNA downstream 79 50856090 ~ 50987810 (-) False LOC110523998
XM_021603246.2 mRNA downstream 79 50856090 ~ 50987810 (-) False LOC110523998
XM_036977755.1 mRNA downstream 79 50939717 ~ 50987810 (-) True LOC110523998
XM_021603259.2 mRNA upstream 112995 51152280 ~ 51173859 (-) False LOC110524002
XM_021603260.2 mRNA upstream 112995 51152280 ~ 51173859 (-) False LOC110524002
XM_021603261.2 mRNA upstream 112995 51152280 ~ 51173859 (-) False LOC110524002
XM_021603262.2 mRNA upstream 112995 51152280 ~ 51173860 (-) False LOC110524002
XM_021603264.2 mRNA upstream 112995 51152280 ~ 51173860 (-) False LOC110524002
TU467086 other downstream 263812 50723159 ~ 50724077 (-) True G411930
TU467085 other downstream 264828 50722314 ~ 50723061 (-) True G411929
TU466579 other downstream 368714 50618891 ~ 50619175 (-) True G411459
TU465237 other downstream 1411433 49533916 ~ 49576456 (-) True G410168
TU463711 other downstream 2630324 48353711 ~ 48357565 (-) True G408782
TU467428 other upstream 140473 51179758 ~ 51184775 (-) False LOC110524003
TU467562 other upstream 334180 51373465 ~ 51377130 (-) True G412372
TU467825 other upstream 519093 51558378 ~ 51612562 (-) True G412613
TU470637 other upstream 2578398 53617683 ~ 53618759 (-) False G415256
TU470639 other upstream 2578453 53617738 ~ 53618864 (-) True G415256

Expression Profile