Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472396 |
| length | 459 |
| RNA type | TUCP |
| GC content | 0.53 |
| exon number | 5 |
| gene id | LOC110524071 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 55123617 ~ 55181458 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
55,128,000
55,132,000
55,136,000
55,140,000
55,144,000
55,148,000
55,152,000
55,156,000
55,160,000
55,164,000
NC_048569.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472377 | lncRNA | downstream | 28114 | 55112757 ~ 55113201 (-) | True | G416744 |
| TU472373 | lncRNA | downstream | 37115 | 55103051 ~ 55104200 (-) | True | si:ch211-221n20.8 |
| TU472361 | lncRNA | downstream | 44018 | 55094943 ~ 55097297 (-) | True | G416733 |
| TU472303 | lncRNA | downstream | 67463 | 55072105 ~ 55073852 (-) | True | LOC110524069 |
| TU472339 | lncRNA | downstream | 74205 | 55045989 ~ 55067110 (-) | True | G416712 |
| TU472416 | lncRNA | upstream | 6186 | 55166453 ~ 55166685 (-) | True | G416777 |
| TU472417 | lncRNA | upstream | 6898 | 55167165 ~ 55167470 (-) | True | G416778 |
| TU473108 | lncRNA | upstream | 76821 | 55237088 ~ 55237467 (-) | True | G417386 |
| TU473082 | lncRNA | upstream | 87967 | 55248234 ~ 55250837 (-) | True | LOC118964623 |
| TU473077 | lncRNA | upstream | 91273 | 55251540 ~ 55255098 (-) | True | G417357 |
| XM_036977865.1 | mRNA | downstream | 19126 | 55102959 ~ 55122189 (-) | False | si:ch211-221n20.8 |
| XM_036977866.1 | mRNA | downstream | 19127 | 55102959 ~ 55122188 (-) | False | si:ch211-221n20.8 |
| XM_036977864.1 | mRNA | downstream | 19128 | 55102959 ~ 55122187 (-) | False | si:ch211-221n20.8 |
| XM_021603381.2 | mRNA | downstream | 67364 | 55072085 ~ 55073951 (-) | False | LOC110524069 |
| XM_021603380.2 | mRNA | downstream | 69377 | 55051724 ~ 55071938 (-) | True | LOC110524068 |
| XM_036977867.1 | mRNA | upstream | 22347 | 55182614 ~ 55232811 (-) | False | LOC110524072 |
| XM_021603385.2 | mRNA | upstream | 22347 | 55182614 ~ 55236556 (-) | False | LOC110524072 |
| XM_021603384.2 | mRNA | upstream | 22347 | 55182614 ~ 55236572 (-) | False | LOC110524072 |
| XM_021603386.2 | mRNA | upstream | 22347 | 55182614 ~ 55236572 (-) | True | LOC110524072 |
| XR_005051764.1 | mRNA | upstream | 87866 | 55248133 ~ 55249963 (-) | False | LOC118964623 |
| TU471641 | other | downstream | 755087 | 54363286 ~ 54386228 (-) | False | G416110 |
| TU470869 | other | downstream | 1135642 | 54003731 ~ 54005673 (-) | True | G415464 |
| TU470822 | other | downstream | 1248409 | 53890760 ~ 53892906 (-) | True | G415420 |
| TU470639 | other | downstream | 1522451 | 53617738 ~ 53618864 (-) | True | G415256 |
| TU470637 | other | downstream | 1522556 | 53617683 ~ 53618759 (-) | False | G415256 |
| TU473281 | other | upstream | 448568 | 55608835 ~ 55609730 (-) | True | G417527 |
| TU474559 | other | upstream | 1548531 | 56708798 ~ 56709840 (-) | False | LOC110522975 |
| TU474560 | other | upstream | 1550013 | 56710280 ~ 56711384 (-) | True | LOC110522975 |
| TU474707 | other | upstream | 1673759 | 56834026 ~ 56834595 (-) | True | G418830 |
| TU475541 | other | upstream | 2450792 | 57611059 ~ 57611567 (-) | True | G419603 |
