Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU474030 |
| length | 896 |
| RNA type | TUCP |
| GC content | 0.40 |
| exon number | 5 |
| gene id | LOC100135807 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 56943838 ~ 56958165 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0009081 | branched-chain amino acid metabolic process | biological_process |
| GO:0046949 | fatty-acyl-CoA biosynthetic process | biological_process |
| GO:0048037 | obsolete cofactor binding | molecular_function |
| GO:0043754 | dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU474072 | lncRNA | upstream | 1173 | 56942425 ~ 56942665 (+) | True | G418265 |
| TU474071 | lncRNA | upstream | 1879 | 56941754 ~ 56941959 (+) | True | G418264 |
| TU474011 | lncRNA | upstream | 75633 | 56864489 ~ 56868205 (+) | False | G418209 |
| TU474012 | lncRNA | upstream | 75633 | 56864489 ~ 56868205 (+) | True | G418209 |
| TU474013 | lncRNA | upstream | 79614 | 56863974 ~ 56864224 (+) | True | G418210 |
| TU474059 | lncRNA | downstream | 5829 | 56963994 ~ 56965420 (+) | True | G418252 |
| TU474104 | lncRNA | downstream | 52021 | 57010186 ~ 57011064 (+) | True | G418297 |
| TU474102 | lncRNA | downstream | 55452 | 57013617 ~ 57015171 (+) | True | G418295 |
| TU474130 | lncRNA | downstream | 81571 | 57039736 ~ 57039941 (+) | True | G418323 |
| TU474195 | lncRNA | downstream | 184816 | 57142981 ~ 57143200 (+) | True | G418379 |
| XM_021603443.2 | mRNA | upstream | 155185 | 56779858 ~ 56788653 (+) | True | dph5 |
| XM_021603437.2 | mRNA | upstream | 241682 | 56696618 ~ 56702156 (+) | False | serpinc1 |
| XM_021603438.2 | mRNA | upstream | 241682 | 56696637 ~ 56702156 (+) | True | serpinc1 |
| XM_021603435.2 | mRNA | upstream | 255249 | 56658922 ~ 56688589 (+) | True | rc3h1a |
| XM_036977915.1 | mRNA | upstream | 262550 | 56658921 ~ 56681288 (+) | False | rc3h1a |
| XM_021603458.2 | mRNA | downstream | 57763 | 57015928 ~ 57037694 (+) | True | LOC110524109 |
| XR_005051954.1 | mRNA | downstream | 68160 | 57026325 ~ 57026460 (+) | True | LOC118964761 |
| XM_036979052.1 | mRNA | downstream | 80952 | 57039117 ~ 57061390 (+) | True | nwd1 |
| XM_021603461.2 | mRNA | downstream | 106747 | 57064912 ~ 57074678 (+) | False | LOC110524113 |
| XM_021603463.2 | mRNA | downstream | 106747 | 57064912 ~ 57074722 (+) | False | LOC110524113 |
| TU474058 | other | upstream | 18662 | 56923924 ~ 56925176 (+) | True | G418251 |
| TU473915 | other | upstream | 214017 | 56726185 ~ 56729821 (+) | True | G418119 |
| TU473866 | other | upstream | 315221 | 56617890 ~ 56628617 (+) | True | G418077 |
| TU472519 | other | upstream | 1618567 | 55324645 ~ 55325271 (+) | True | G416857 |
| TU471439 | other | upstream | 2330696 | 54590074 ~ 54613142 (+) | False | G415946 |
| TU475029 | other | downstream | 407199 | 57365364 ~ 57367337 (+) | True | LOC110524119 |
| TU475377 | other | downstream | 926215 | 57884380 ~ 57899648 (+) | True | G419452 |
| TU476101 | other | downstream | 1454958 | 58413123 ~ 58416776 (+) | False | G420117 |
| TU476694 | other | downstream | 1984563 | 58942728 ~ 58944217 (+) | True | G420634 |
| TU478964 | other | downstream | 3736092 | 60694257 ~ 60695905 (+) | True | LOC110524226 |
