Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021603504.2 |
| length | 1366 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 5 |
| gene id | LOC110524141 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58163918 ~ 58187049 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07882 | RAB3A; Ras-related protein Rab-3A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476268 | lncRNA | downstream | 9115 | 58154580 ~ 58154803 (-) | True | G420254 |
| TU476262 | lncRNA | downstream | 18762 | 58144488 ~ 58145156 (-) | True | G420248 |
| TU476257 | lncRNA | downstream | 28062 | 58135356 ~ 58135856 (-) | True | G420243 |
| TU476249 | lncRNA | downstream | 52344 | 58110782 ~ 58111574 (-) | True | G420236 |
| TU476247 | lncRNA | downstream | 52626 | 58109657 ~ 58111292 (-) | False | G420236 |
| TU476328 | lncRNA | upstream | 64589 | 58251638 ~ 58251915 (-) | True | G420313 |
| TU476329 | lncRNA | upstream | 66153 | 58253202 ~ 58253429 (-) | True | G420314 |
| TU476330 | lncRNA | upstream | 66501 | 58253550 ~ 58253764 (-) | True | G420315 |
| TU476331 | lncRNA | upstream | 67282 | 58254331 ~ 58254556 (-) | True | G420316 |
| TU476335 | lncRNA | upstream | 72572 | 58259621 ~ 58259877 (-) | True | G420320 |
| XM_036976510.1 | mRNA | downstream | 43879 | 58115798 ~ 58120039 (-) | False | pgpi |
| NM_001160660.1 | mRNA | downstream | 43885 | 58115817 ~ 58120033 (-) | True | pgpi |
| XM_021603498.2 | mRNA | downstream | 54473 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| XM_021603499.2 | mRNA | downstream | 54473 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| XM_021603500.2 | mRNA | downstream | 54473 | 58092311 ~ 58109445 (-) | False | LOC110524138 |
| LOC118964716 | mRNA | upstream | 190509 | 58377558 ~ 58380045 (-) | True | LOC118964716 |
| XM_021603517.2 | mRNA | upstream | 192731 | 58379780 ~ 58394796 (-) | False | LOC110524144 |
| XM_036977959.1 | mRNA | upstream | 192731 | 58379780 ~ 58409320 (-) | False | LOC110524144 |
| XM_021603522.2 | mRNA | upstream | 229823 | 58416872 ~ 58454099 (-) | False | mast3b |
| XM_021603520.2 | mRNA | upstream | 229823 | 58416872 ~ 58475232 (-) | False | mast3b |
| TU476193 | other | downstream | 49858 | 58112387 ~ 58114060 (-) | True | G420193 |
| TU475656 | other | downstream | 457982 | 57699745 ~ 57705936 (-) | True | G419714 |
| TU475533 | other | downstream | 537744 | 57620054 ~ 57626174 (-) | True | LOC110524128 |
| TU475541 | other | downstream | 552351 | 57611059 ~ 57611567 (-) | True | G419603 |
| TU474707 | other | downstream | 1329323 | 56834026 ~ 56834595 (-) | True | G418830 |
| TU476443 | other | upstream | 226079 | 58413128 ~ 58414143 (-) | True | G420421 |
| TU477090 | other | upstream | 839054 | 59026103 ~ 59036299 (-) | True | G420982 |
| TU477230 | other | upstream | 945821 | 59132870 ~ 59138257 (-) | True | lsg1 |
| TU478587 | other | upstream | 1913716 | 60100765 ~ 60101056 (-) | True | G422347 |
| TU479791 | other | upstream | 2871945 | 61058994 ~ 61071143 (-) | True | LOC110524239 |
