Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU476548 |
| length | 564 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | LOC110524154 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 58579542 ~ 58620188 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU476546 | lncRNA | upstream | 16685 | 58602250 ~ 58602784 (+) | False | LOC110524154 |
| TU476527 | lncRNA | upstream | 38006 | 58579580 ~ 58581463 (+) | False | LOC110524154 |
| TU476542 | lncRNA | upstream | 40849 | 58578104 ~ 58578620 (+) | True | G420511 |
| TU476525 | lncRNA | upstream | 61021 | 58557388 ~ 58558448 (+) | True | G420495 |
| TU476501 | lncRNA | upstream | 125796 | 58490968 ~ 58493673 (+) | True | LOC110524147 |
| TU476567 | lncRNA | downstream | 583 | 58620615 ~ 58643531 (+) | True | LOC110524153 |
| TU476583 | lncRNA | downstream | 49484 | 58669516 ~ 58669975 (+) | True | LOC110524159 |
| TU476603 | lncRNA | downstream | 59554 | 58679586 ~ 58679864 (+) | True | G420545 |
| TU476665 | lncRNA | downstream | 182862 | 58802894 ~ 58803093 (+) | True | G420606 |
| TU476667 | lncRNA | downstream | 183950 | 58803982 ~ 58804208 (+) | True | G420608 |
| XR_005051804.1 | mRNA | upstream | 2945 | 58579542 ~ 58616524 (+) | False | LOC110524154 |
| XR_005051807.1 | mRNA | upstream | 6366 | 58579542 ~ 58613103 (+) | False | LOC110524154 |
| XR_005051808.1 | mRNA | upstream | 6366 | 58579542 ~ 58613103 (+) | False | LOC110524154 |
| XR_005051809.1 | mRNA | upstream | 9787 | 58579542 ~ 58609682 (+) | False | LOC110524154 |
| XM_021603538.2 | mRNA | downstream | 486 | 58620518 ~ 58646110 (+) | False | LOC110524153 |
| XM_021603539.2 | mRNA | downstream | 486 | 58620518 ~ 58646110 (+) | False | LOC110524153 |
| XM_021603541.2 | mRNA | downstream | 27128 | 58647160 ~ 58656842 (+) | True | LOC110524155 |
| XR_002473549.2 | mRNA | downstream | 41878 | 58661910 ~ 58669974 (+) | False | LOC110524159 |
| XM_021603542.2 | mRNA | downstream | 54226 | 58674258 ~ 58699892 (+) | False | LOC110524157 |
| TU476101 | other | upstream | 202693 | 58413123 ~ 58416776 (+) | False | G420117 |
| TU475377 | other | upstream | 719821 | 57884380 ~ 57899648 (+) | True | G419452 |
| TU475029 | other | upstream | 1252132 | 57365364 ~ 57367337 (+) | True | LOC110524119 |
| TU474030 | other | upstream | 1661304 | 56943838 ~ 56958165 (+) | True | LOC100135807 |
| TU474058 | other | upstream | 1694293 | 56923924 ~ 56925176 (+) | True | G418251 |
| TU476694 | other | downstream | 322696 | 58942728 ~ 58944217 (+) | True | G420634 |
| TU478964 | other | downstream | 2074225 | 60694257 ~ 60695905 (+) | True | LOC110524226 |
| TU480287 | other | downstream | 3101505 | 61721537 ~ 61722024 (+) | True | G423922 |
| TU480458 | other | downstream | 3485491 | 62105523 ~ 62105872 (+) | True | G424079 |
| TU480579 | other | downstream | 3663120 | 62283152 ~ 62306937 (+) | False | LOC110524265 |
