Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021603693.2 |
| length | 1349 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC110524234 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 60939330 ~ 60942382 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07905 | RAB11B; Ras-related protein Rab-11B |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU479115 | lncRNA | upstream | 825 | 60938291 ~ 60938505 (+) | True | G422843 |
| TU479113 | lncRNA | upstream | 8053 | 60930972 ~ 60931277 (+) | True | G422841 |
| TU479110 | lncRNA | upstream | 12345 | 60924263 ~ 60926985 (+) | True | G422838 |
| TU479083 | lncRNA | upstream | 48882 | 60890178 ~ 60890448 (+) | True | G422814 |
| TU479080 | lncRNA | upstream | 49340 | 60887584 ~ 60889990 (+) | True | G422811 |
| TU479117 | lncRNA | downstream | 5921 | 60948303 ~ 60949300 (+) | True | G422845 |
| TU479129 | lncRNA | downstream | 27012 | 60969394 ~ 60969655 (+) | True | G422856 |
| TU479143 | lncRNA | downstream | 29255 | 60971637 ~ 60971903 (+) | True | G422860 |
| TU479144 | lncRNA | downstream | 29575 | 60971957 ~ 60972184 (+) | True | G422861 |
| TU479141 | lncRNA | downstream | 35630 | 60978012 ~ 60988260 (+) | True | G422858 |
| XM_036978001.1 | mRNA | upstream | 77959 | 60770757 ~ 60861371 (+) | False | LOC110524227 |
| XM_036978002.1 | mRNA | upstream | 77959 | 60770757 ~ 60861371 (+) | False | LOC110524227 |
| XM_036978000.1 | mRNA | upstream | 80792 | 60770756 ~ 60858538 (+) | False | LOC110524227 |
| XM_021603683.2 | mRNA | upstream | 243426 | 60694220 ~ 60695904 (+) | False | LOC110524226 |
| XM_021603679.2 | mRNA | upstream | 246567 | 60690473 ~ 60692763 (+) | False | LOC110524224 |
| XM_036978012.1 | mRNA | downstream | 135122 | 61077504 ~ 61081007 (+) | True | LOC118964633 |
| XM_021603715.2 | mRNA | downstream | 306190 | 61248572 ~ 61265206 (+) | True | tm6sf2 |
| XM_036978014.1 | mRNA | downstream | 324833 | 61267215 ~ 61285666 (+) | True | hapln4 |
| XM_021603719.2 | mRNA | downstream | 648221 | 61590603 ~ 61599332 (+) | True | nr2c2ap |
| XM_021603721.2 | mRNA | downstream | 694722 | 61637104 ~ 61655108 (+) | False | LOC110524248 |
| TU478964 | other | upstream | 243425 | 60694257 ~ 60695905 (+) | True | LOC110524226 |
| TU476694 | other | upstream | 1995113 | 58942728 ~ 58944217 (+) | True | G420634 |
| TU476101 | other | upstream | 2522554 | 58413123 ~ 58416776 (+) | False | G420117 |
| TU475377 | other | upstream | 3039682 | 57884380 ~ 57899648 (+) | True | G419452 |
| TU475029 | other | upstream | 3571993 | 57365364 ~ 57367337 (+) | True | LOC110524119 |
| TU480287 | other | downstream | 779155 | 61721537 ~ 61722024 (+) | True | G423922 |
| TU480458 | other | downstream | 1163141 | 62105523 ~ 62105872 (+) | True | G424079 |
| TU480579 | other | downstream | 1340770 | 62283152 ~ 62306937 (+) | False | LOC110524265 |
| TU481721 | other | downstream | 2102708 | 63045090 ~ 63051530 (+) | True | G425224 |
| TU482675 | other | downstream | 2734032 | 63676414 ~ 63684239 (+) | True | nfil3-4 |
