RNA id: XM_021603965.2



Basic Information


Item Value
RNA id XM_021603965.2
length 1179
RNA type mRNA
GC content 0.45
exon number 4
gene id mob3a
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 66349573 ~ 66355573 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACCTCACTCTCTGCAACATGATTTGACCCTTCAACAGTCTCAGGACTAACATCATCTGTGAGAAAAATAAAACCAGTGTGTAACAGCTCCACTGTTGTTGATTTCTCCTCCATCTAACCAGTACATAATTATTTAAGACATAAACAAACTGCCACATGCAACAATGTCCATGGCCCTGAAGCAAGTCTTCAACAAGGACAGGACATTCCGGCCGAAGCGTAAGTTTGAGCCCGGGACACAGCGCTTCGAGCTGCACAAGAAGGCCCAGGCGTCTCTGAATGCAGGCCTGGACCTGAAGCAGGCGGTAGCACTGCCCCATGGAGAGGACCTGAATGACTGGGTAGCCGTGCACGTGGTGGACTTCTTCAACCGCATCAACCTCATCTACGGCACCATCAGCGACTCCTGCACCGACCAGACCTGCCCTGTAATGTCTGGAGGGCCCAAGTACGAGTACCGCTGGCAGGATGAGCACAAGTACAAGAAGCCCACAGCCGTTCCAGCCCCAAAGTACATGAGCCTGCTGATGGACTGGATTGAGGTACAGATCAACAACGAACACATCTTCCCCACCAACGTCGgTACTCCCTTCCCCAAGACCTTCATGCAGGTAGCTAAGAAGATTTTGTCTCGCTTGTTCCGTGTGTTCGTCCACGTCTACATCCACCACTTTGATCGTGTGAGCCAGATGGGTGCAGAGGCCCACGTCAATACCTGTTACAAGCACTTCTACTACTTCGTAACAGAGTTCAACCTCACAGACCATAAGGAGCTTGAGCCACTGaaagagatgacatcacagatgtGCCACTAAGGGAGCGCCACTGACCACTTGACACATTCCCCCTTGAAGACTAGTTCCGTCCATGTAGAAGAATGAAACAGGAAACGTAAACCAAATCTAAAAGAGTCTTTATTTTTATAAACAAGTACTGTAATCTATTTTAACCATGTAGGTCTTTTTAACCAGGAACCTTGTAAGGCATTCTGTTCCTTTTAATGTTTTGAGCATTTTATCAGAGCACAGTATTAAGAGATCTTTCTTTTTTAATTTGAAGCTGAATCATTCCTGTCATTTAGTTCTCATATCTTAAAATAATATATGTATGTTTGTACATATCTAAGATTGTAGTATGTGGTGACATTAAAGATACTCATTCTATGTTCCTACTCTAAACT

Function


GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU485784 lncRNA upstream 18867 66330913 ~ 66331460 (+) True G428822
TU485767 lncRNA upstream 38581 66310817 ~ 66311746 (+) True G428805
TU485766 lncRNA upstream 40867 66307570 ~ 66309460 (+) True G428804
TU485765 lncRNA upstream 41628 66307570 ~ 66308699 (+) False G428804
TU485723 lncRNA upstream 54915 66268550 ~ 66295412 (+) True G428763
TU485807 lncRNA downstream 7980 66363553 ~ 66363813 (+) True G428841
TU485886 lncRNA downstream 142787 66498360 ~ 66498598 (+) True G428912
TU485892 lncRNA downstream 150706 66506279 ~ 66506618 (+) True G428918
TU485896 lncRNA downstream 154329 66509902 ~ 66510264 (+) True G428922
TU485826 lncRNA downstream 301162 66656735 ~ 66658029 (+) True G428857
XM_021603962.2 mRNA upstream 1092 66340581 ~ 66349235 (+) False LOC110524376
XM_021603963.2 mRNA upstream 1092 66340581 ~ 66349235 (+) True LOC110524376
XR_005051834.1 mRNA upstream 101979 66240540 ~ 66248348 (+) True LOC118964639
XM_021603954.2 mRNA upstream 139471 66183663 ~ 66210856 (+) False acsbg2
XM_036978121.1 mRNA downstream 9946 66365519 ~ 66383789 (+) True mknk2b
XM_021603967.2 mRNA downstream 45523 66401096 ~ 66412427 (+) True rexo1
XM_021603968.2 mRNA downstream 74698 66430271 ~ 66433596 (+) True LOC110524380
XM_021603969.2 mRNA downstream 79098 66434671 ~ 66480586 (+) False csnk1g2b
XM_021603971.2 mRNA downstream 79098 66434671 ~ 66480586 (+) False csnk1g2b
TU485654 other upstream 207722 66142079 ~ 66142605 (+) True G428696
TU484533 other upstream 828947 65453856 ~ 65521380 (+) True G427747
TU484228 other upstream 1321625 65024715 ~ 65028702 (+) False LOC110524338
TU486149 other downstream 626376 66981949 ~ 67048164 (+) True G429156
TU487389 other downstream 1105156 67460729 ~ 67464143 (+) False LOC110524407
TU487402 other downstream 1105156 67460729 ~ 67464323 (+) True LOC110524407
TU487928 other downstream 1747606 68103179 ~ 68103534 (+) True G430796
TU488020 other downstream 1857143 68212716 ~ 68214104 (+) True LOC110524423

Expression Profile