Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021603993.2 |
| length | 939 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | pigx |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 66800442 ~ 66812587 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006506 | GPI anchor biosynthetic process | biological_process |
| GO:0005789 | endoplasmic reticulum membrane | cellular_component |
| id | description |
|---|---|
| K07541 | PIGX; GPI mannosyltransferase 1 subunit X |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU485818 | lncRNA | upstream | 16198 | 66784937 ~ 66785516 (+) | True | LOC110524392 |
| TU486016 | lncRNA | upstream | 48261 | 66753235 ~ 66753453 (+) | True | G429028 |
| TU485984 | lncRNA | upstream | 93936 | 66707547 ~ 66707778 (+) | True | G429001 |
| TU485975 | lncRNA | upstream | 103715 | 66671245 ~ 66697999 (+) | True | G428992 |
| TU485826 | lncRNA | upstream | 143685 | 66656735 ~ 66658029 (+) | True | G428857 |
| TU486059 | lncRNA | downstream | 28110 | 66840697 ~ 66884634 (+) | True | rpp21 |
| TU486092 | lncRNA | downstream | 73596 | 66886183 ~ 66886424 (+) | True | G429102 |
| TU486093 | lncRNA | downstream | 75073 | 66887660 ~ 66887884 (+) | True | G429103 |
| TU486825 | lncRNA | downstream | 259204 | 67071791 ~ 67072079 (+) | True | G429767 |
| TU486829 | lncRNA | downstream | 261088 | 67073675 ~ 67073875 (+) | True | G429771 |
| XM_036978147.1 | mRNA | upstream | 1642 | 66792704 ~ 66800072 (+) | False | LOC110524394 |
| XM_021603990.2 | mRNA | downstream | 292 | 66812879 ~ 66839267 (+) | False | pak2b |
| XM_036978144.1 | mRNA | downstream | 5030 | 66817617 ~ 66839267 (+) | False | pak2b |
| XM_036978145.1 | mRNA | downstream | 14497 | 66827084 ~ 66839267 (+) | True | pak2b |
| trnag-gcc-10 | mRNA | downstream | 30712 | 66843299 ~ 66843369 (+) | True | trnag-gcc-10 |
| trnag-gcc-11 | mRNA | downstream | 36415 | 66849002 ~ 66849072 (+) | True | trnag-gcc-11 |
| TU485654 | other | upstream | 659109 | 66142079 ~ 66142605 (+) | True | G428696 |
| TU484533 | other | upstream | 1280334 | 65453856 ~ 65521380 (+) | True | G427747 |
| TU484228 | other | upstream | 1773012 | 65024715 ~ 65028702 (+) | False | LOC110524338 |
| TU486149 | other | downstream | 169362 | 66981949 ~ 67048164 (+) | True | G429156 |
| TU487389 | other | downstream | 648142 | 67460729 ~ 67464143 (+) | False | LOC110524407 |
| TU487402 | other | downstream | 648142 | 67460729 ~ 67464323 (+) | True | LOC110524407 |
| TU487928 | other | downstream | 1290592 | 68103179 ~ 68103534 (+) | True | G430796 |
| TU488020 | other | downstream | 1400129 | 68212716 ~ 68214104 (+) | True | LOC110524423 |
