Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021604087.2 |
| length | 4813 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 19 |
| gene id | LOC110524449 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 69704871 ~ 69714330 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| id | description |
|---|---|
| K23213 | SIN3B; paired amphipathic helix protein Sin3b |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU491147 | lncRNA | downstream | 1580 | 69656009 ~ 69703291 (-) | False | G433735 |
| TU491146 | lncRNA | downstream | 1580 | 69699036 ~ 69703291 (-) | True | G433735 |
| TU491134 | lncRNA | downstream | 148380 | 69555019 ~ 69556491 (-) | True | G433725 |
| TU491098 | lncRNA | downstream | 199945 | 69502514 ~ 69504926 (-) | True | G433697 |
| TU491083 | lncRNA | downstream | 215113 | 69489450 ~ 69489758 (-) | True | G433688 |
| TU491232 | lncRNA | upstream | 15225 | 69729555 ~ 69729792 (-) | True | G433814 |
| TU491236 | lncRNA | upstream | 18625 | 69732955 ~ 69733165 (-) | True | G433818 |
| TU491238 | lncRNA | upstream | 22614 | 69736944 ~ 69737409 (-) | True | G433820 |
| TU491318 | lncRNA | upstream | 153003 | 69867333 ~ 69886159 (-) | True | G433889 |
| TU491353 | lncRNA | upstream | 183599 | 69897929 ~ 69899326 (-) | True | G433918 |
| XM_036978245.1 | mRNA | downstream | 85796 | 69551803 ~ 69619075 (-) | True | LOC110524447 |
| XM_036978235.1 | mRNA | downstream | 354320 | 69239531 ~ 69350551 (-) | True | LOC110524442 |
| XM_036978234.1 | mRNA | downstream | 354321 | 69239531 ~ 69350550 (-) | False | LOC110524442 |
| XM_036978237.1 | mRNA | downstream | 354321 | 69239531 ~ 69350550 (-) | False | LOC110524442 |
| XM_036978238.1 | mRNA | downstream | 354322 | 69239531 ~ 69350549 (-) | False | LOC110524442 |
| XM_021604089.2 | mRNA | upstream | 952 | 69715282 ~ 69728407 (-) | False | LOC110524450 |
| XM_021604090.2 | mRNA | upstream | 952 | 69715282 ~ 69728426 (-) | True | LOC110524450 |
| XM_021604092.2 | mRNA | upstream | 24033 | 69738363 ~ 69742378 (-) | False | LOC110524451 |
| XM_036978248.1 | mRNA | upstream | 24033 | 69738363 ~ 69742378 (-) | False | LOC110524451 |
| XM_036978247.1 | mRNA | upstream | 24033 | 69738363 ~ 69742403 (-) | False | LOC110524451 |
| TU491077 | other | downstream | 180081 | 69522814 ~ 69524790 (-) | True | G433683 |
| TU489837 | other | downstream | 698765 | 69004619 ~ 69006106 (-) | True | G432513 |
| TU489614 | other | downstream | 949814 | 68750217 ~ 68755057 (-) | True | G432338 |
| TU489586 | other | downstream | 997423 | 68699821 ~ 68707448 (-) | True | G432310 |
| TU489232 | other | downstream | 1352126 | 68340204 ~ 68352745 (-) | True | bend5 |
| TU492773 | other | upstream | 1276562 | 70990892 ~ 70991798 (-) | True | G435234 |
| TU492700 | other | upstream | 1353695 | 71068025 ~ 71068887 (-) | True | G435176 |
| TU492901 | other | upstream | 1514852 | 71229182 ~ 71230589 (-) | True | LOC110524478 |
| TU492898 | other | upstream | 1572060 | 71286390 ~ 71286992 (-) | True | il23r |
| TU493828 | other | upstream | 2326632 | 72040962 ~ 72121697 (-) | True | G436172 |
