Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021604121.2 |
| length | 7760 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 6 |
| gene id | nlgn1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 70065855 ~ 70348330 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|---|
| K07378 | NLGN; neuroligin |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU490496 | lncRNA | upstream | 16286 | 70049090 ~ 70049569 (+) | True | G433121 |
| TU490489 | lncRNA | upstream | 25278 | 70040350 ~ 70040577 (+) | True | G433114 |
| TU490483 | lncRNA | upstream | 33533 | 70032011 ~ 70032322 (+) | True | G433108 |
| TU490455 | lncRNA | upstream | 33932 | 70001771 ~ 70031923 (+) | True | G433080 |
| TU490394 | lncRNA | upstream | 147552 | 69918063 ~ 69918303 (+) | True | G433020 |
| TU490792 | lncRNA | downstream | 389002 | 70737332 ~ 70738303 (+) | True | LOC110524461 |
| TU492015 | lncRNA | downstream | 451327 | 70799657 ~ 70800461 (+) | True | G434565 |
| TU491961 | lncRNA | downstream | 495455 | 70843785 ~ 70846161 (+) | True | G434512 |
| TU492052 | lncRNA | downstream | 522894 | 70871224 ~ 70871447 (+) | True | G434600 |
| TU492106 | lncRNA | downstream | 605153 | 70953483 ~ 70953694 (+) | True | G434650 |
| XM_036978255.1 | mRNA | upstream | 158292 | 69871717 ~ 69907563 (+) | False | ect2 |
| XM_036978253.1 | mRNA | upstream | 158292 | 69871718 ~ 69907563 (+) | False | ect2 |
| XM_036978254.1 | mRNA | upstream | 158292 | 69871719 ~ 69907563 (+) | False | ect2 |
| XM_036978251.1 | mRNA | upstream | 158292 | 69871720 ~ 69907563 (+) | True | ect2 |
| XM_021604102.2 | mRNA | upstream | 196529 | 69776736 ~ 69869326 (+) | True | mcf2l2 |
| XM_021604123.2 | mRNA | downstream | 107135 | 70455465 ~ 70738345 (+) | False | LOC110524461 |
| XM_021604126.2 | mRNA | downstream | 390878 | 70739208 ~ 70836826 (+) | False | si:ch211-51h4.2 |
| XM_036978257.1 | mRNA | downstream | 390878 | 70739208 ~ 70836826 (+) | True | si:ch211-51h4.2 |
| XM_021604132.2 | mRNA | downstream | 633727 | 70982057 ~ 71012481 (+) | False | si:ch211-247n2.1 |
| XM_021604133.2 | mRNA | downstream | 634706 | 70983036 ~ 71012481 (+) | True | si:ch211-247n2.1 |
| TU488020 | other | upstream | 1851751 | 68212716 ~ 68214104 (+) | True | LOC110524423 |
| TU487928 | other | upstream | 1962321 | 68103179 ~ 68103534 (+) | True | G430796 |
| TU487402 | other | upstream | 2601532 | 67460729 ~ 67464323 (+) | True | LOC110524407 |
| TU487389 | other | upstream | 2601712 | 67460729 ~ 67464143 (+) | False | LOC110524407 |
| TU486149 | other | upstream | 3017691 | 66981949 ~ 67048164 (+) | True | G429156 |
| TU492109 | other | downstream | 611280 | 70959610 ~ 70959932 (+) | True | G434653 |
| TU492265 | other | downstream | 870459 | 71218789 ~ 71223578 (+) | True | G434792 |
| TU492302 | other | downstream | 950285 | 71298615 ~ 71298900 (+) | True | G434829 |
| TU492480 | other | downstream | 1327541 | 71675871 ~ 71687169 (+) | True | ralgps2 |
| TU494101 | other | downstream | 2155130 | 72503460 ~ 72504435 (+) | True | G436403 |
