RNA id: XR_002473593.2



Basic Information


Item Value
RNA id XR_002473593.2
length 811
RNA type mRNA
GC content 0.52
exon number 3
gene id faslg
representative False

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 71781681 ~ 71792919 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CATCAGGTGCTGTCAATTAGGGTTCAGCATGGCGAGCCATGAGGCTGTTGGTTTGTTTGCTGACCATGTTTTGGTTTTGAAAATGTCATTTGGGCGTGCCTGTGTGTGGTTTCttttttgaatatatttatttcccaCACCACCAACTGAACAACAGTAATCCATTTGTGCTGGCTGACCATGACGTCAAGAGAGCAAGAGCTGGCCCTGGACCAAGGTTAACATTGAGAGCCAAGGTTGTGCGCCTGAGAAGCTAGTGGGTGACCTTCCAGAGTCTGATCCAGACACAGGGAAGAAGGCCAGCAGACCTGCAGCACACGTCATAGGCCGGATCGAGAAGGATGTTTCCCAGAATACCTTGCGTTGGGAGCCCAAGGCAGGGCGGGCCTTCACTGAGGGAGGCGTGGTCTATCGGGATGGTGGTCTGCAGGTCAACGAGACTGGGCTCTACCACATCTACTCCCGGGTGCAGTTTGAGGCCAATCACTGCACCCCTACAGATGCCTTGATTCACTCTGTGTTTGTGAGGAGGCCCTGGAGCTCCAAGCCTCTCACCTTGATAGAGGCGCACAGGGAGGGCTACTGCAGCTCGGGCTCTAATGGGCGTGTCTGGACCTCTGGGAGTTACCTGGGCTCCACACTGCAGCTGGAGAAGCAGGACTGGGTCTATGTGAACGTCTCCCACCCAGCCATGCTCAGCCACACTCATCATGCCAACTTCTTTGGACTCCACAAGATCTAGCGAAAAAGGATGAAATCTGGAGTTGGTTTCAACTGATATTTCACTCAGAGAACCTTAACACTAAAATGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU493242 lncRNA downstream 41149 71730069 ~ 71740813 (-) True G435640
TU493224 lncRNA downstream 55700 71726043 ~ 71726262 (-) True G435624
TU493208 lncRNA downstream 72299 71708032 ~ 71709663 (-) True G435610
TU493201 lncRNA downstream 85422 71695821 ~ 71696540 (-) True G435608
TU493199 lncRNA downstream 87828 71693934 ~ 71694134 (-) True G435606
TU493523 lncRNA upstream 78392 71871311 ~ 71871524 (-) True G435901
TU493623 lncRNA upstream 239470 72032389 ~ 72032606 (-) True G435997
TU493851 lncRNA upstream 291231 72084150 ~ 72084631 (-) True G436194
TU493858 lncRNA upstream 299798 72092717 ~ 72096564 (-) True G436199
TU493875 lncRNA upstream 330887 72123806 ~ 72126279 (-) True G436204
XM_021604206.2 mRNA downstream 120498 71621173 ~ 71661464 (-) True angptl1a
XM_021604207.2 mRNA downstream 120934 71621173 ~ 71661028 (-) False angptl1a
XM_021604200.2 mRNA downstream 239219 71532452 ~ 71542743 (-) True zyg11
XR_005051939.1 mRNA downstream 328701 71453146 ~ 71453261 (-) True LOC118964746
XM_021604194.2 mRNA downstream 341844 71435035 ~ 71440118 (-) False LOC110524487
XM_036978293.1 mRNA upstream 24626 71817545 ~ 71826630 (-) False si:dkey-86e18.1
XM_036978292.1 mRNA upstream 24626 71817545 ~ 71826642 (-) False si:dkey-86e18.1
XM_021604212.2 mRNA upstream 24626 71817545 ~ 71827011 (-) False si:dkey-86e18.1
XM_021604211.2 mRNA upstream 24626 71817545 ~ 71827015 (-) True si:dkey-86e18.1
XM_036976499.1 mRNA upstream 38722 71831641 ~ 71833770 (-) False jun
TU492898 other downstream 494970 71286390 ~ 71286992 (-) True il23r
TU492901 other downstream 551373 71229182 ~ 71230589 (-) True LOC110524478
TU492700 other downstream 713075 71068025 ~ 71068887 (-) True G435176
TU492773 other downstream 790164 70990892 ~ 70991798 (-) True G435234
TU491077 other downstream 2257172 69522814 ~ 69524790 (-) True G433683
TU493828 other upstream 248043 72040962 ~ 72121697 (-) True G436172
TU494572 other upstream 795365 72588284 ~ 72588576 (-) True G436830
TU494584 other upstream 823377 72616296 ~ 72616944 (-) True G436842
TU494589 other upstream 879235 72672154 ~ 72672826 (-) True G436847
TU494616 other upstream 981642 72774561 ~ 72775868 (-) True G436873

Expression Profile