RNA id: XM_021604225.2


Basic Information

Item Value
RNA id XM_021604225.2
length 2935
RNA type mRNA
GC content 0.52
exon number 10
gene id mettl13
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 72235213 ~ 72239514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCAGAGCTATCCAATCGAAATGTAGTTGTGTACAGCTCGGAATAATGTCCGGGTGAACATGCCATGTGGGAAAGATAGGGAGCTGAAAATCCAAACATTTCTAGCTTGATAATACGTTTTTCGACCAATTGACAATCTACCAATTGCTACCGTTACACATTTATAATGTCCTGCCTGTTCCTGAATCTTAGCTAGCTTGTTCAAAGCTAATCGAAAGTATTCTAACgttagtttgtttacaagaagctagctagctactgatatAGACCTAGCAAGTGTTAAAGATGAGTCTTCTACCTCGCACTGCCGAGGAGTTCAGTTCTGCAGAGTACTGGGAACGCTTCTtcaagaagagaggagagaaggcttTTGAGTGGTATGGAGACTACAACAAACTCTGTGGCATGCTGCACAAATACATCAAACCGCGGGATAAGGTCTTGGTGGTGGGCTGTGGTAACTCTGAGCTGAGTGAGCAGCTGTATGACGTTGGCTACAGACATCTGACCAACATTGACATTAGTGAGACGGTGGTGAATCACATGAACCAGAAGAATGCCAAGCAGCGCCCAGACCTGACCTTCCAGACGGTGGATGCCACCCAGACGCCCTACGAGGACGGAAGCTACCAGGCTGTACTGGACAAGGGGACACTGGACGCCATGGCCTCCCAGGAGGGGGCTCTAGCTGGGAGGATGCTGGCTGAGGTGGGCCGTGTCCTGGGTATAGGAGGCCGCTACGTCTGTGTGACCCTGGCCCAGGAGAGTGTCATCAAGCTGGCTGTGGAGCACTTCATCCAGGTGGGCTGGGCTGTGAGACTCCATTGTCTGGGTGACCCAGAGAGCCAGGAGGACTCTTCCTTCGCTCTGCCTGTCTTCGTATTGGTTTGCACAAAGTTCCGCCAGCCAATGCCCATGCCCATCCTGGAGATGTGCCAAGGGGAGGATGGTATCCCCGTGAGGCTTCCCATGGTGGCAGACCTGCTGTCTGTGGTGAGAGAGCGCCAGGCATACGCCATGCTGAGACAGAGGCTCCGTACAGGTACAGACGCGACCTCTACCCCCTCGTTGACCCTCTGCCATGCCCCCACTGGGCGACCCCGCTACACTCTCACCGTACAGGACTGCCCCCCTGGTGCCAAGGTTCCTCGTGCAAACCACTTTGCCATCTTCATAGTGCCTCAGGGCAGAGAGACTGATTGGCTGTACGGCTTGGCTGAGGGGCGGGGCCAACTAGCGGCTAGCGCTAACTTCAGACGTCTGGTTGTCGTGGCCATGCACAGAGAACAGGAGTATACCGACATGCAGGCTGTCCAATCAGAGCTCTCCCCCATGGTGATGGAACTCGCCCCCCCTGGGATGCCAGCCAATCAGAAAGTTCCGTTCCTGTCGGTGGGAGGTGAGCTGGGTtggagggaggtggtgagtcaTGGTACCAGTGATCTGAGTGGTCAGTACTCTGTAGAGGacgtgagaggagaggatggtcaGCTCTACCGTAGACTGGTGTTCCTGGGTAACGACGGACTGGTCCAGTCAGAGAGCCGCCTCACTAATCCAGCAGCAGCAGCCTCGTCTCAGAAGAATAAAAAGAGCAGAAGGAAAGCCAAGCCCTCTGCCCCTCTCCCAATGACAACCCCATCCCAGACACCAGGTGGCGCCCTGGAGGTGGACAAAGGCTATCTATGCTGTGCCCACCACAGGGTCATGGTGGCTGGCCTCGCCATGCTAGGAGTGGGCACCGACCACAACAAAGATGTCCCAGTGTCAGTGCTCCTGGTGGGACTGGGTGGAGGAGGGCTGCCCCAGTTCCTGCGGGACTTTGTACCTGGAGCcagggtggaggtggtggagctGGATCCGGCAGTACTGGAGGTGGCTCAGGGATGGTTCGGCTTCACACCTGATGACAGGCTCACTGTCACACTGGGAGATGGACTGGAACACATTAACAACAttgagagagaagGTGGTCATCAGTAtgatgtcatcatgtttgacGTGGACAGTAAGGACCCCAGTTTGGGGATGAGCTGTCCTCCTCCTGCCTTCGTAGAAACAGCCTTCCTGGAGAGAGTTGGCAATCTGCTGACATCTCGAGGTGTGTTCATGTTGAACCTTGTGTGTCGTGACTCTGCATTGAAGAAGAGTGTGTTGGGTCGTGTGCGGGGTGTGTTCCCGCGTGTGCTCTCCCGGGGCATCGAGGGGGAGGTCAACGAGGTGCTGCTGTGCTCCAGGGGAACGAGGGAGACAGGGGTCCCGCCCAGCCTGCTGAAGGCAGGGAAGACTCTACAGGTAGCACTGGGCATGAACAGCAGTAGAACAGCAACCTGCATCCCTCAGATAGACATCACTGAGCTGCTAGAGGACCTGAACGTGGcatgagggagagggggatgaggagaagaggacaaTGTGAAAAAGTATCATTTTAATTCTCAAAATGCTACATGCAATAATGtatgaaataaaaatgttaaggtgtatactgaacaaaaatataaatgctacATGTGATAATTTCAGAGTTGCAGTTCATATTAGGAAATAATttgatttaaataaaataattaggccctaacctatggatttcacgactgggaatacagatatgcatctgtagaGCATGGATcaggaaaccagtcagtatctggtgtgaccaccatttgcctcatgcagtgtgacacatctccttcgcatagagtttatCAGGCTGTTGATAGTGGCCAATGGactgttgtcccactcttcaatggatttgcgaagttgctggatattggcgggaactggaacacgctgtcgtacacgtcgatccagatcatcccaaacatgctcattgggtgacatatctggtgagcATGCAAGCTATGGAAGAAGTGGGACATTTTCACCTTCCAGGAAATGTGTACAGAATAAATAAACGTTTTATTCTCAAA

Function

GO: NA

KEGG:

id description
K25166 EEF1AKNMT, METTL13; eEF1A lysine and N-terminal methyltransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU493651 lncRNA upstream 18826 72212395 ~ 72216387 (+) False G436017
TU493652 lncRNA upstream 18826 72212395 ~ 72216387 (+) True G436017
TU493653 lncRNA upstream 23536 72209845 ~ 72211677 (+) True G436018
TU493648 lncRNA upstream 63804 72171171 ~ 72171409 (+) True G436015
TU493419 lncRNA upstream 229623 72002883 ~ 72005590 (+) True G435801
TU493689 lncRNA downstream 17415 72256929 ~ 72260707 (+) True G436049
TU493702 lncRNA downstream 40680 72280194 ~ 72284469 (+) True G436059
TU493693 lncRNA downstream 45129 72284643 ~ 72285257 (+) True G436051
TU493713 lncRNA downstream 56732 72296246 ~ 72298469 (+) True G436069
TU493780 lncRNA downstream 130084 72369598 ~ 72369995 (+) True G436131
XM_021604228.2 mRNA upstream 7032 72219897 ~ 72228181 (+) True myoc
XM_021604220.2 mRNA upstream 25552 72175641 ~ 72209661 (+) False LOC110524504
XM_036978302.1 mRNA downstream 404 72239918 ~ 72269866 (+) False LOC110524507
XM_036978303.1 mRNA downstream 404 72239918 ~ 72269866 (+) False LOC110524507
XM_036978304.1 mRNA downstream 404 72239918 ~ 72269866 (+) True LOC110524507
XM_021604235.2 mRNA downstream 123338 72362852 ~ 72377582 (+) False LOC110524510
XR_005051848.1 mRNA downstream 138268 72377782 ~ 72393450 (+) False LOC110524509
TU492480 other upstream 548044 71675871 ~ 71687169 (+) True ralgps2
TU492302 other upstream 936313 71298615 ~ 71298900 (+) True G434829
TU492265 other upstream 1011635 71218789 ~ 71223578 (+) True G434792
TU492109 other upstream 1275281 70959610 ~ 70959932 (+) True G434653
TU488020 other upstream 4021109 68212716 ~ 68214104 (+) True LOC110524423
TU494101 other downstream 263946 72503460 ~ 72504435 (+) True G436403
TU494306 other downstream 755985 72995499 ~ 72995735 (+) True G436588
TU495122 other downstream 1216787 73456301 ~ 73495084 (+) True G437327
TU496738 other downstream 2523690 74763204 ~ 74770166 (+) True LOC110524560
TU496740 other downstream 2532495 74772009 ~ 74776469 (+) True G438719

Expression Profile