RNA id: XM_021604256.2


Basic Information

Item Value
RNA id XM_021604256.2
length 2582
RNA type mRNA
GC content 0.49
exon number 13
gene id LOC100135942
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 73207860 ~ 73218158 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCGGTATCCAGGTAGCTCAGGTGAAGGACTCCTGCAAAAGCCTCCACTGCAGGGCAATGCCTCTTCATCCAGAATTTAGAGATACTCCGTCTCCCACTCTTGATGATGATGgtaaggcacctaaagactcagtcGTCCTGCCGGCATATTCTACCATGGACCTGGTGGACAAGGACCCGGATGAGGATGACCCCTGGAACCTCCCTGAACTGCAGGACACTGGACTCAAGTGGTCAGAGTTGGATGCCAAAGGGAAGGTTATGCGGGTTCTGACTTCCATCGTCAAGTTTATTCTGCTGGTTGGATTTCTCTACATGTTTGTCTGCTCTCTGGACGTCCTGAGCTCTGCTTTCCAGCTAGTTGGAGGTAAGGCAGCCGGGGACATCTTCCAGGACAATGCGGTGCTGTCCAACCCTGTGGCTGGCCTGGTGATTGGAGTGCTGGTCACAGTGTTAGTCCAGAGTTCTAGCACGTCCTCCTCTATTGTGGTCAGCATGGTGTCTTCTGGATTGCTGGAGGTCCAGTCTGCCGTGCCTGTCATTATGGGAGCCAACATTGGAacctctgtcaccaacactatcGTGGCGATGATGCAGGCAGGAGACAGAAATGAGTTCCGCAGGGCGTTTGCTGGTGCCACGGTGCATGACTTCTTTAACTGGCTGTCTGTGCTGATCCTGCTACCGCTGGAGGCAGCCACTGGTGTCCTGTATAAACTCACCAAGATTGTCATCGACTCCTTTAACATCCAGGGGGGTGACAATGCCCCTGACCTGCTAAACGTCATCACTGACCCCCTCACCAGTGCCATCATAGAGCTGGATAAAACGGTCATCAGTGACATTGCCACGGGTGACCCAGCGGCCAGAAACAAGAGTCTGATCAAAATCTGGTGCAAAACAGAGAATATCACGacTCTTTTAAATATAACAGTTCCCTCAGCTGCCAACTGCACAATCGGCGTCCCCTGTTGGGTGGAAGGCAACAAGACATGGACGCAGATAAATGTTACTGAGACGATCAATCTAGAGAGATGTAACCATATCTTTGCCTATGCTAACCTGCCTGACCTGGCTGTGGGCCTCATCCTGCTGGCCCTGTCCCTGCTCATCCTCTGTACCTGCCTCATCCTCATCGTCAAGCTGCTCAACTCCATGCTCAAGGGACAGGTGGCCGTGGTCATCAAAAAGGTGCTCAACACAGACTTCCCCTTCCCCTTCGGCTGGGTCACTGGTTACATTGCCATCCTGGTCGGAGCAGGAATGACCTTCATCGTTCAGAGCAGCTCTGTCTTCACCTCTGCAATCACGCCCCTTGTTGGTATTGGTGTTATTAGCCTTGAGAGAGCCTATCCCCTGACATTGGGCTCTAATATCGGCACAACTACCACTGCTATTCTTGCTGCTATGGCTGCTCCCGGGGAAACCCTGGCCAACTCACTGCAGATTGCACTGTGCCATTTCTTCTTCAACATAGCGGGGATCCTGCTGTGGTATCCTATCCCCTTCACTCGGATCCCCATCCGCTTGGCCAGAGCCCTGGGGAACCGCACAGCCAACTACCGCTGGTTCGCAGCGATCTACCTCTTGCTCTGCTTCTTCCTCATGCCCCTAACCATCCTGGGGCTCTCCCTGGCCGGCTGGCAGGCCCTGGTGGGGGTGGCTGTGCCCATCGTTGTCCTggccatcttcatcatcatcgtcaACCTGATGCAGACGCGTTGTCCTCGGTACCTGCCCAGCAGGCTCCGGAACTGGGACTTCTTGCCCCGCCCCCTGCACTCCATGGCCCCCTGGGATGGAGTGATTATGTCTGGCATGGCCTTCTGCGGCacccgctgctgctgctgctgtaagTGCTGCCAGAAGACTGAGGATGAAGAGAAGGGTGgtaaggagaggaagaagagtcaAGAGATGTATGATAACCCAGCCCTAACCAGAGACAATGAGCCACTAGAAGCTCCCAAGGAAACTGTGAAAGctacacagctctgacacagttATGAATTCACTGTAACACATCTGTAAGACATATATAACCAATTTGTAACATATATGTAATCCTCCACATTTGCTCAGGCTTTATGGAGTTAACCGGTCTCTGTTTAGGTGATACTGTATCATGAAGTGGTGAAGGCCTGAACACAGCAACTGTACTTCTTGTAGGAGAACATCACCATATATAGCTAAAACCACTCCATGGAATCATACAGACTCATTATGTACATCCGTCATACATTTTTGATCATGTTTATTGAATGTATCATTTCAACTTTCATGATAAAATAGAATGGGATAAACATGCAAtttgaaaaaatgtttttattaatgCATCACTTactatttaaaaatgttttaccttttgATATTTGTAAATAATACAAATTGTTAGTTGTAAACAGAATGTTGTGATATATTTCCAATTAGTGTAATGTTCCTATTTGATCATTTACTGTATTGCATTGTGTATTGTATCATGACTGACTGTCATTTTACATTCTGTCGGACTGAATACATGTTGGTATTTGTTTTATATGGGTTTCACAGTATTGTCTCTCATCAATAAATATTAGAAACCAA

Function

GO: NA

KEGG:

id description
K14683 SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU494855 lncRNA downstream 44476 73155642 ~ 73163384 (-) True LOC110524523
TU494845 lncRNA downstream 81496 73125420 ~ 73126364 (-) True G437075
TU494843 lncRNA downstream 85833 73121401 ~ 73122027 (-) True G437073
TU494839 lncRNA downstream 93008 73114613 ~ 73114852 (-) True G437069
TU494837 lncRNA downstream 94131 73113458 ~ 73113729 (-) True G437067
TU495113 lncRNA upstream 222086 73440244 ~ 73440536 (-) True G437318
TU495538 lncRNA upstream 268509 73486667 ~ 73488455 (-) True G437660
TU495566 lncRNA upstream 313450 73531608 ~ 73532196 (-) True G437680
TU495601 lncRNA upstream 375936 73594094 ~ 73594489 (-) True G437705
TU495599 lncRNA upstream 379219 73597377 ~ 73598010 (-) True G437703
XM_036976526.1 mRNA downstream 18922 73188025 ~ 73188938 (-) True LOC110522885
XM_021604253.2 mRNA downstream 26971 73174706 ~ 73180889 (-) True LOC110524524
XM_021604252.2 mRNA downstream 44429 73132102 ~ 73163431 (-) False LOC110524523
XM_021604248.2 mRNA downstream 97957 73106039 ~ 73109903 (-) True LOC110524520
XM_021604246.2 mRNA downstream 145446 73053844 ~ 73062414 (-) False LOC110524518
XM_036978342.1 mRNA upstream 152281 73370439 ~ 73419304 (-) False LOC110524526
XM_036978340.1 mRNA upstream 152281 73370439 ~ 73421682 (-) False LOC110524526
XM_036978341.1 mRNA upstream 152281 73370439 ~ 73421683 (-) False LOC110524526
XM_021604258.2 mRNA upstream 213405 73431563 ~ 73444514 (-) True LOC110524527
XM_021604266.2 mRNA upstream 339215 73557373 ~ 73574822 (-) True LOC110524532
TU494857 other downstream 60732 73146358 ~ 73147128 (-) False G437079
TU494858 other downstream 60732 73146358 ~ 73147128 (-) False G437079
TU494859 other downstream 60732 73146358 ~ 73147128 (-) True G437079
TU494844 other downstream 82822 73122112 ~ 73125038 (-) True G437074
TU494824 other downstream 112524 73094794 ~ 73095336 (-) True G437054
TU495056 other upstream 152450 73370608 ~ 73410339 (-) True LOC110524526
TU497050 other upstream 1647101 74865259 ~ 74927797 (-) True G439002
TU497119 other upstream 1745302 74963460 ~ 74963696 (-) True LOC110523004
TU497719 other upstream 2045315 75263473 ~ 75265403 (-) True G439594
TU497923 other upstream 2353091 75571249 ~ 75575569 (-) True G439788

Expression Profile