RNA id: XM_021604397.2



Basic Information


Item Value
RNA id XM_021604397.2
length 676
RNA type mRNA
GC content 0.43
exon number 4
gene id glrx2
representative False

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 76587005 ~ 76588980 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ttgttcttcCCACTACGCTTCATTTCCTCCCACTGGGAGATGAACTttcttgggttagttatacatATCTTTGATCCACCCCTCTTGTATAATAATGTACTTCCGGTAGTCAAGGATGGGAAACTTCACATCCTTCAGCTCAAGTGGTCTGTCAAGCACAACAGCATGTGGTCAGTTTCTACAGGAGGTGGTGTCTCATAACTGCATTGTCATATTTTCCAAGACCACTTGTCCATATTGCAAAATGGCCAAAAATGTATTCAATGAAATTGGTGCTACATACAAGGTGATAGAGCTGGATGAACACAACGATGGAAGACGACTACAAGAGGCCTTGGCGCAGATGACCGGTGCCAGAACAGTTCCGAGGGTCTTCATCAATGGAAACTGCATTGGAGGAGGCTCTGACACAAAGGAACTACACCAGAAGGGAAAGCTGCTGCCTCTGATAGAACAATGTGCCCCGTGCTGCGTGAAAATTAACACTGAAGGCTCGGGCAGCGGACAGTTCGAGTCCACCAAATGACTAACCGTTCTAATTCTCACTGTAATTTATCCTGTGTTTATTTAATGTTTCCTCGACTTTGTGTGATCACTTGTTATCGTCACCCTTCGTCTACATTCAGGGAATGTACAGTATTTTAatgaattaaatcaaatcaaatttattacatca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU499387 lncRNA downstream 20543 76563705 ~ 76566462 (-) True G441179
TU499155 lncRNA downstream 107979 76478824 ~ 76479026 (-) True G440965
TU499140 lncRNA downstream 118044 76468712 ~ 76468961 (-) True G440950
TU499088 lncRNA downstream 155555 76431099 ~ 76431450 (-) True G440899
TU498604 lncRNA downstream 244591 76324920 ~ 76342414 (-) True G440430
TU499399 lncRNA upstream 8365 76597342 ~ 76608244 (-) True G441190
TU499471 lncRNA upstream 108335 76697312 ~ 76697574 (-) True G441254
TU499448 lncRNA upstream 115667 76704644 ~ 76707910 (-) True G441231
TU499486 lncRNA upstream 140503 76729480 ~ 76729680 (-) True G441268
TU499665 lncRNA upstream 283846 76872823 ~ 76873048 (-) True G441446
XM_021604391.2 mRNA downstream 327 76578249 ~ 76586678 (-) True LOC110524587
XM_021604392.2 mRNA downstream 2922 76578243 ~ 76584083 (-) False LOC110524587
XM_036978426.1 mRNA downstream 262137 76288921 ~ 76324868 (-) True LOC110524583
XM_021604384.2 mRNA downstream 268350 76288921 ~ 76318655 (-) False LOC110524583
XM_036978427.1 mRNA downstream 268387 76288921 ~ 76318618 (-) False LOC110524583
XM_021604409.2 mRNA upstream 403014 76991991 ~ 76996276 (-) True LOC110524596
XM_021604411.2 mRNA upstream 592937 77181914 ~ 77215782 (-) False LOC110524597
XM_021604410.2 mRNA upstream 592938 77181915 ~ 77215911 (-) False LOC110524597
XR_002473616.2 mRNA upstream 594072 77183049 ~ 77215911 (-) True LOC110524597
XM_021604412.2 mRNA upstream 687928 77276905 ~ 77402910 (-) False LOC110524600
TU497923 other downstream 1011436 75571249 ~ 75575569 (-) True G439788
TU497719 other downstream 1321602 75263473 ~ 75265403 (-) True G439594
TU497119 other downstream 1623309 74963460 ~ 74963696 (-) True LOC110523004
TU497050 other downstream 1659208 74865259 ~ 74927797 (-) True G439002
TU495056 other downstream 3176666 73370608 ~ 73410339 (-) True LOC110524526
TU499702 other upstream 313405 76902382 ~ 76902771 (-) True G441483
TU499853 other upstream 425022 77013999 ~ 77021375 (-) True G441630
TU500354 other upstream 817765 77406742 ~ 77407135 (-) True G442115
TU500657 other upstream 1034322 77623299 ~ 77627214 (-) False G442381
TU501172 other upstream 1492768 78081745 ~ 78082010 (-) True G442807

Expression Profile