Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021604453.2 |
| length | 1232 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 7 |
| gene id | LOC110524621 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 78239768 ~ 78245830 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
| GO:0016592 | mediator complex | cellular_component |
| id | description |
|---|---|
| K15129 | MED8; mediator of RNA polymerase II transcription subunit 8 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU501489 | lncRNA | downstream | 2485 | 78233349 ~ 78237283 (-) | True | G443066 |
| TU501563 | lncRNA | downstream | 9259 | 78229753 ~ 78230509 (-) | True | G443122 |
| TU501490 | lncRNA | downstream | 11533 | 78224562 ~ 78228235 (-) | True | G443067 |
| TU501513 | lncRNA | downstream | 75210 | 78163103 ~ 78164558 (-) | True | G443082 |
| TU501124 | lncRNA | downstream | 201171 | 78038321 ~ 78038597 (-) | True | G442759 |
| TU501589 | lncRNA | upstream | 51938 | 78297768 ~ 78298784 (-) | True | G443147 |
| TU501601 | lncRNA | upstream | 81122 | 78326952 ~ 78327162 (-) | True | G443159 |
| TU501602 | lncRNA | upstream | 82366 | 78328196 ~ 78328428 (-) | True | G443160 |
| TU501604 | lncRNA | upstream | 85752 | 78331582 ~ 78331821 (-) | True | G443162 |
| TU501606 | lncRNA | upstream | 89647 | 78335477 ~ 78335918 (-) | True | G443164 |
| XM_021604447.2 | mRNA | downstream | 252113 | 77983744 ~ 77987655 (-) | True | glulb |
| XM_021604446.2 | mRNA | downstream | 300767 | 77925215 ~ 77939001 (-) | False | znf648 |
| XM_021604443.2 | mRNA | downstream | 364925 | 77871765 ~ 77874843 (-) | True | gadd45ab |
| XM_036978450.1 | mRNA | downstream | 597619 | 77627457 ~ 77642149 (-) | True | LOC110524609 |
| XM_021604434.2 | mRNA | downstream | 599974 | 77627457 ~ 77639794 (-) | False | LOC110524609 |
| XM_021604464.2 | mRNA | upstream | 137175 | 78383005 ~ 78387067 (-) | True | hyi |
| XM_021604478.2 | mRNA | upstream | 973323 | 79219153 ~ 79226639 (-) | False | LOC110524635 |
| LOC118964722 | mRNA | upstream | 997417 | 79243247 ~ 79282591 (-) | True | LOC118964722 |
| XR_005051973.1 | mRNA | upstream | 1048429 | 79294259 ~ 79294385 (-) | True | LOC118964780 |
| XM_036978488.1 | mRNA | upstream | 1139710 | 79385540 ~ 79459507 (-) | False | cdh2 |
| TU501172 | other | downstream | 157758 | 78081745 ~ 78082010 (-) | True | G442807 |
| TU500657 | other | downstream | 612554 | 77623299 ~ 77627214 (-) | False | G442381 |
| TU500354 | other | downstream | 832633 | 77406742 ~ 77407135 (-) | True | G442115 |
| TU499853 | other | downstream | 1218393 | 77013999 ~ 77021375 (-) | True | G441630 |
| TU499702 | other | downstream | 1336997 | 76902382 ~ 76902771 (-) | True | G441483 |
| TU502514 | other | upstream | 718801 | 78964631 ~ 78966029 (-) | True | G444001 |
| TU502678 | other | upstream | 977310 | 79223140 ~ 79237461 (-) | False | LOC110524635 |
| TU502679 | other | upstream | 978173 | 79224003 ~ 79225868 (-) | True | LOC110524635 |
| TU503246 | other | upstream | 1485157 | 79730987 ~ 79731536 (-) | True | G444691 |
| TU503706 | other | upstream | 1736631 | 79982461 ~ 79987704 (-) | False | G445115 |
