Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC110523016 |
| length | 476 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 5 |
| gene id | LOC110523016 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 81892826 ~ 81920506 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0036047 | peptidyl-lysine demalonylation | biological_process |
| GO:0036049 | peptidyl-lysine desuccinylation | biological_process |
| GO:0036054 | protein-malonyllysine demalonylase activity | molecular_function |
| GO:0036055 | protein-succinyllysine desuccinylase activity | molecular_function |
| GO:0070403 | NAD+ binding | molecular_function |
| id | description |
|---|---|
| K11415 | SIRT5, SIR2L5; NAD+-dependent protein deacetylase sirtuin 5 |
81,892,000
81,896,000
81,900,000
81,904,000
81,908,000
81,912,000
81,916,000
81,920,000
81,924,000
81,928,000
81,932,000
81,936,000
81,940,000
81,944,000
81,948,000
81,952,000
NC_048569.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU505073 | lncRNA | upstream | 44559 | 81847047 ~ 81848267 (+) | True | G446357 |
| TU505036 | lncRNA | upstream | 125256 | 81766459 ~ 81767570 (+) | True | G446325 |
| TU505032 | lncRNA | upstream | 132601 | 81759958 ~ 81760225 (+) | True | G446321 |
| TU505028 | lncRNA | upstream | 144252 | 81748371 ~ 81748574 (+) | True | G446317 |
| TU505027 | lncRNA | upstream | 146735 | 81745891 ~ 81746091 (+) | True | G446316 |
| TU505127 | lncRNA | downstream | 15673 | 81936179 ~ 81936412 (+) | True | G446405 |
| TU505128 | lncRNA | downstream | 18687 | 81939193 ~ 81939466 (+) | True | G446406 |
| TU505133 | lncRNA | downstream | 23759 | 81944265 ~ 81944489 (+) | True | G446411 |
| TU505135 | lncRNA | downstream | 27173 | 81947679 ~ 81947906 (+) | True | G446413 |
| TU505140 | lncRNA | downstream | 30935 | 81951441 ~ 82072880 (+) | True | G446414 |
| XM_021604515.2 | mRNA | upstream | 67130 | 81781102 ~ 81825696 (+) | False | LOC110524668 |
| XM_021604516.2 | mRNA | upstream | 67130 | 81781114 ~ 81825696 (+) | False | LOC110524668 |
| XM_021604517.2 | mRNA | upstream | 67130 | 81781117 ~ 81825696 (+) | True | LOC110524668 |
| XM_036978547.1 | mRNA | upstream | 258647 | 81625006 ~ 81634179 (+) | True | bphl |
| XM_021604507.2 | mRNA | upstream | 317431 | 81417392 ~ 81575395 (+) | False | LOC110524662 |
| XM_036979070.1 | mRNA | downstream | 12478 | 81932984 ~ 82130511 (+) | True | LOC110523017 |
| XM_036979071.1 | mRNA | downstream | 219324 | 82139830 ~ 82141500 (+) | True | LOC118964728 |
| XM_036978551.1 | mRNA | downstream | 221278 | 82141784 ~ 82149709 (+) | True | LOC118936420 |
| NM_001278935.1 | mRNA | downstream | 297966 | 82218472 ~ 82220496 (+) | True | igfbp1a |
| XM_036978554.1 | mRNA | downstream | 621031 | 82541537 ~ 82600595 (+) | False | LOC110523018 |
| TU503808 | other | upstream | 1657398 | 80234880 ~ 80235428 (+) | True | G445211 |
| TU503801 | other | upstream | 1675736 | 80216478 ~ 80217090 (+) | True | G445204 |
| TU501263 | other | upstream | 3634370 | 78245839 ~ 78258456 (+) | False | LOC110524622 |
| TU505814 | other | downstream | 503692 | 82424198 ~ 82442223 (+) | False | G447001 |
| TU505812 | other | downstream | 520469 | 82440975 ~ 82442223 (+) | True | G447001 |
| TU505834 | other | downstream | 532100 | 82452606 ~ 82457616 (+) | False | G447020 |
| TU505837 | other | downstream | 532100 | 82452606 ~ 82458383 (+) | False | G447020 |
| TU507400 | other | downstream | 1868512 | 83789018 ~ 83794353 (+) | True | LOC110524684 |
