RNA id: TU405208


Basic Information

Item Value
RNA id TU405208
length 242
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G357064
representative False

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19502 ~ 69804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtctatcaaataatattagagacagtagatgtagctgactgtcgtaatataatagagacagtaggtctagttggtctgtcataatataatagagcagtagatctagctgatctgtcatattataatacagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcatattgtaatagagccaatagatctagctggtctgttataatataatagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU405195 lncRNA downstream 1473 22693 ~ 38694 (+) False G357064
TU405204 lncRNA downstream 14451 35671 ~ 39010 (+) False G357064
TU405173 lncRNA downstream 15021 36241 ~ 40179 (+) False G357064
TU405191 lncRNA downstream 15021 36241 ~ 43827 (+) True G357064
TU405212 lncRNA downstream 24719 45939 ~ 47594 (+) True G357065
XM_036976551.1 mRNA downstream 67828 89048 ~ 186339 (+) True palm2akap2
XM_036976548.1 mRNA downstream 203789 225009 ~ 285133 (+) False LOC110523064
XM_036976549.1 mRNA downstream 213304 234524 ~ 285133 (+) False LOC110523064
XM_036976550.1 mRNA downstream 238890 260110 ~ 285133 (+) False LOC110523064
XM_036976552.1 mRNA downstream 275406 296626 ~ 312598 (+) True LOC110524922
TU405294 other downstream 179497 200717 ~ 201642 (+) True G357136
TU405615 other downstream 390069 411289 ~ 416443 (+) False LOC110523070
TU405616 other downstream 390069 411289 ~ 416443 (+) False LOC110523070
TU405617 other downstream 390069 411289 ~ 416529 (+) False LOC110523070
TU405618 other downstream 390069 411289 ~ 416443 (+) True LOC110523070

Expression Profile