RNA id: TU405191


Basic Information

Item Value
RNA id TU405191
length 325
lncRNA type inter_gene
GC content 0.34
exon number 2
gene id G357064
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 19502 ~ 69804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tgtagcttgtctgtcataatataatatagagagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcatattataatagagacagtagatctagctggtctgttatattataatagagacagtagatctagctggtctgtgataatataatagagacagtagatctagctggtctgttataatataatagagacagtagatcaagctggtctgttataatataatagagacagtcgatctagctggtaagTCATATTAtaaaacagacagtagatctagctggtctgtcataatataatagag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU405208 lncRNA upstream 15021 19502 ~ 21220 (+) False G357064
TU405212 lncRNA downstream 2112 45939 ~ 47594 (+) True G357065
TU405220 lncRNA downstream 4013 47840 ~ 50995 (+) True G357071
TU405228 lncRNA downstream 21095 64922 ~ 145934 (+) False G357078
TU405262 lncRNA downstream 69533 113360 ~ 118405 (+) True G357109
TU405267 lncRNA downstream 98348 142175 ~ 143689 (+) True G357114
XM_036976551.1 mRNA downstream 45221 89048 ~ 186339 (+) True palm2akap2
XM_036976548.1 mRNA downstream 181182 225009 ~ 285133 (+) False LOC110523064
XM_036976549.1 mRNA downstream 190697 234524 ~ 285133 (+) False LOC110523064
XM_036976550.1 mRNA downstream 216283 260110 ~ 285133 (+) False LOC110523064
XM_036976552.1 mRNA downstream 252799 296626 ~ 312598 (+) True LOC110524922
TU405294 other downstream 156890 200717 ~ 201642 (+) True G357136
TU405615 other downstream 367462 411289 ~ 416443 (+) False LOC110523070
TU405616 other downstream 367462 411289 ~ 416443 (+) False LOC110523070
TU405617 other downstream 367462 411289 ~ 416529 (+) False LOC110523070
TU405618 other downstream 367462 411289 ~ 416443 (+) True LOC110523070

Expression Profile