Item | Value |
---|---|
RNA id | TU408119 |
length | 301 |
lncRNA type | inter_gene |
GC content | 0.49 |
exon number | 1 |
gene id | G359341 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 3151428 ~ 3151728 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU408116 | lncRNA | upstream | 3919 | 3146614 ~ 3147509 (+) | True | G359338 |
TU408110 | lncRNA | upstream | 8051 | 3139643 ~ 3143377 (+) | True | G359333 |
TU408101 | lncRNA | upstream | 23257 | 3127418 ~ 3128171 (+) | True | G359327 |
TU408102 | lncRNA | upstream | 29510 | 3113655 ~ 3121918 (+) | False | G359328 |
TU408128 | lncRNA | downstream | 2982 | 3154710 ~ 3158237 (+) | False | G359343 |
TU408129 | lncRNA | downstream | 2982 | 3154710 ~ 3158237 (+) | False | G359343 |
TU408132 | lncRNA | downstream | 2982 | 3154710 ~ 3158237 (+) | False | G359343 |
TU408133 | lncRNA | downstream | 2982 | 3154710 ~ 3158237 (+) | False | G359343 |
TU408136 | lncRNA | downstream | 2982 | 3154710 ~ 3158237 (+) | False | G359343 |
XM_036976612.1 | mRNA | upstream | 2838 | 3140042 ~ 3148590 (+) | False | si:busm1-57f23.1 |
XM_036976613.1 | mRNA | upstream | 2838 | 3140418 ~ 3148590 (+) | False | si:busm1-57f23.1 |
XM_021601519.2 | mRNA | upstream | 2838 | 3140659 ~ 3148590 (+) | False | si:busm1-57f23.1 |
XM_021601518.2 | mRNA | upstream | 2838 | 3145137 ~ 3148590 (+) | True | si:busm1-57f23.1 |
XR_005051623.1 | mRNA | upstream | 44189 | 3032849 ~ 3107239 (+) | False | LOC110524930 |
XM_036976617.1 | mRNA | downstream | 107203 | 3258931 ~ 3329266 (+) | False | musk |
XM_036976618.1 | mRNA | downstream | 109812 | 3261540 ~ 3329266 (+) | True | musk |
XM_036976532.1 | mRNA | downstream | 396220 | 3547948 ~ 3635115 (+) | True | grin3a |
XM_036976627.1 | mRNA | downstream | 1409622 | 4561350 ~ 4567030 (+) | False | LOC110523122 |
XM_036976626.1 | mRNA | downstream | 1409622 | 4561350 ~ 4598573 (+) | False | LOC110523122 |
TU408069 | other | upstream | 44232 | 3099563 ~ 3107196 (+) | True | LOC110524930 |
TU408046 | other | upstream | 149346 | 3001274 ~ 3002082 (+) | True | G359294 |
TU407791 | other | upstream | 534098 | 2616878 ~ 2617330 (+) | True | G359084 |
TU407205 | other | upstream | 1104403 | 2046674 ~ 2047025 (+) | True | G358596 |
TU407062 | other | upstream | 1246550 | 1900363 ~ 1904878 (+) | True | LOC110523096 |
TU408186 | other | downstream | 65216 | 3216944 ~ 3217529 (+) | True | G359369 |
TU408187 | other | downstream | 73329 | 3225057 ~ 3229530 (+) | False | G359370 |
TU408188 | other | downstream | 73329 | 3225057 ~ 3231615 (+) | True | G359370 |
TU408189 | other | downstream | 77866 | 3229594 ~ 3237305 (+) | True | G359371 |
TU408266 | other | downstream | 195781 | 3347509 ~ 3379319 (+) | True | G359438 |