RNA id: TCONS_00031295


Basic Information

Item Value
RNA id TCONS_00031295
length 4046
RNA type mRNA
GC content 0.46
exon number 31
gene id XLOC_015714
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 36828243 ~ 36854500 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GGCGACGATAAGTTCGGCTGACCCATCATCAGGAGGAAAGCAGCAGAGTCATAAACAGCCCCGTTCACCTCAGCCCCAGTGCTAAAATAGCGTCATTGTTCAGGATGCCCCAGACAAACAAGTTCAAATGTGCTGCAGCCAGCAGTCCGGCTCAATCTGCTGGTCCTGACCGTGGGGAACCAGTCAGAGACCCCAACGCACCTCCAGGGGACAGTGGTGGAGATGAAAACCAGGGAGACCCTCAGATTATCAAATCACCCAGTGACCCCAAACAATACAGATATATTGAGCTGAGTAATGGACTGAGGGCTCTGCTCATCTCTGATCTGAGCGGTTTAGATGGGAAAGctgaagatgaggatgatgaagattCTGAAGAGGAGGAGGCGGAAGAGGAGGCAGAGGGAGAGGAAGAAGAGGGAGACTCGGGGGAAGGAACGGATGAGGAATCTGAAGAGGAAGGAGACAGTCAGGATAGCGATTTTGAGGAGCTAGATGAGGAAAGTgaccagaagaagaaaaaaggatCTGAAAAACAGTCAGCGGCAGCCCTTTGTATTGGGGTAGGGAGTTTCAGTGACCCTAATGATTTACCTGGCCTTGCACACTTCCTGGAGCACATGGTATTCATGGGCAGCGAAAAGTACCCTTCTGAAAATGGCTTTGATGCATTCCTAAAAAAGCACGGCGGCAGTGATAACGCTTCCACTGATTGTGAGAGAACCATTTTCCAATTTGACGTGCAGAGGAAACGCTTTAAAGAAGCCCTTGACAGATGGGCTCAGTTTTTCATATGTCCTCTTATGATTGAAGATGCCATTGATCGAGAGGTTGAGGCTGTGGACAGtgAATATCAGCTTGCCAAGCCGTCCGATTCTCACCGTAAGGAAATGCTCTTTGGCAGCCTCGCAAAGCCCGACCATCCTATGAGCAAATTCTGTTGGGGAAATGCACAGACCCTAAAGACCGAGCCTAAGGAGAAGAACATCAATGTTTACAAGAGACTCCGTGAGTTCTGGAAGAGGCACTACTCTGCCCACTATATGACCCTGGCAGTGCAGTCTAAAGAGAGTCTTGACACCCTTGAGGAATGGGTTAGAGAAATCTTTAGCCAGGTGCCCAACAATGGGCAGCTGAAGCCTGATTTTTCAGACAAGCTGAATCCCTTTGAAACTCCTGCCTTCAACAAACTTTACAGAGTGGTGCCTGTTAGAAAAGTGCATGCCCTCACTATCACATGGGCTCTACCACCTCAAGAAAAGCACTACAGGGTCAAACCTCTCCATTACATCGCTTGGCTGATTGGCCACGAGGGAACTGGAAGTATCCTGTCAATGCTTAGAAGAAAGTGCTGGGCTTTGGCTTTGTTTGGTGGAAACAGCGAAACCGGTTTTGATCAGAACACCACATATTCAATTTTTAGTATCTCCATCACACTGACCGACGAGGGCTTCCAGAACTTCTATGAGGTTGCTCATCTCGTCTTCCAGTACTTGAAAATGCTTCAGACTCTTGGGCCGCAACAGAGaATATATGAAGAAATTCAAAAGATTGAGGCTAATGAATTTCACTATCAGGAGCAGACTGATCCTATTGAGTATGTGGAGGACATTTGTGAAAACATGCAGTTGTTCCCAAAAGAGGACTTCTTAACAGGAGACCAGTTAATGTTCGAGTTCAAACCAGAGGTTATCTCTGCTGCATTGAACCTCCTCACACCAGAGAAGGCCAACTTGCTGCTTTTGTCCCCTGAGCATGAAGGCCAGTGCCCTCTTAGGGAAAAGTGGTTTGGGACTCAGTACAGCACAGAGGACATAGAGCAGCACTGGAGAGAGATCTGGGCAAAAGATTTCGATTTAAATCCCAGCCTTCACCTACCTGCTGAAAATAAGTTCATCGCCACTGATTTTGCCCTCAAGACCTCTGACTGTCCGGACACCGAATATCCTGTCAGAATAATGAACAATGACCGAGGATGTCTGTGGTACAAGAAGGACAACAAGTTCAAGATCCCCAAAGcataCGTGCGGTTCCATCTCATATCACCTGTGGTGCAGAAATCTCCAAAAAACCTGGTGCTTTTTGACTTGTTTGTGAATATCCTGGTTCACAACTTGGCCGAGCCGGCCTATGAGGCTGATGTGGCGCAGCTAGAATATAAACTGGTGGCCGGTGAACATGGCCTAGTCATTAAGGTTAAGGGCTTCAATCACAAACTACCGTTGCTGTTCAACCTGATTGTGGATTATCTTGCCGATTTCTCCGCCGCTCCTGATGTATTCAGCATGTTTGCAGAGCAGCTGAAGAAAACCTACTTTAACATCCTCATCAAGCCGGAGAAGCTTGGAAAGGACGTGAGGCTGCTGATTCTGGAGCACTCGCGCTGGTCCACCATTCAGAAGTACCAGGCTGTGCTGGACGGGCTTAGTGTGGATGAGCTAATGGAGTTTGTGAGTGGCTTCAAGTCTGAGCTTTATGCTGAAGGACTACTGCAGGGAAACGTCACTAGCACTGAATCCATGGGGTTTTTACAATATGTCACAGAAAAATTGCAGTTCAAGAAGTTGTCAGTAGAGGTCCCTGTTCTCTTCAGGGTTGTGGAGCTCCCTCAGAAACATCACCTCTGCAAAGTCAAGTCTCTCAATAAGGGGGATGCAAACTCTGAGGTCACTGTGTATTATCAGTCTGGTCCTAAGAACCTGCGTGAACACACTCTGATGGAGCTGCTTGTGATGCACATGGAGGAGCCGTGTTTTGACTTCCTCCGGACCAAAGAGACTCTGGGATATCACGTCTACCCAACCTGTAGAAACACATCAGGTGTTCTTGGATTCTCCGTAACAGTGGAAACACAGGCCACCAAGTTCAACACTGAACTAGTGGAGACAAAAATTGAGGAATTTCTGGTAAGCTTTGGAGAGAAGATGAACAGCCTGAGCGATGACGCCTTCAGGACACAGGTGACCGCTCTGGTCAAGCTGAAGGGCTGTGAAGACACTCATCTGGGCGAGGAGGTGGACAGGAACTGGACAGAGGTGGTCACGCAGCAGTACGTCTTCGACAGACTGAGCAGAGAGATTGATGCGCTGAAGCTCATGACCAAGGCTGAGCTGGTGAACTGGTTTATGGAGCATCGGGGTGAAGGCAACAGGAAGCTGAGTGTACATgttgTTGGCTACGGAGTAGAAGAAAACGACCCTCCCAATGATCCACATCCTGGAGAAGAAGAAGAGGCCAGCAAGATGTCATTATATGGAGAAGTTTCCAAACTCACCTTCCTTCAAGCTTCCAATCTCCTGGCCTCCGTCAGCACCATAACAGACATCCGGGCCTTCACCCAAACCCTCAACCTCTTTCCTTACCACAAGATTCTCAAATAAACCAACCACCAACCCCAGTATCTCCATCATCCATCCTCTCCTACTGTCATACTTGAGCAAAGGATGagcttcagctgtatgtgtgtgtttgcgtatgtgtgtgtgtgcatgaatgggGCTAAACATGGGGATGGATGCAGGTCTTTAGAACATAAACATGACTTAAAGTACTCAGAATTGTGTGTATTTTATCAATATATCTGCAGTGTTATGTTTGTACTCAAATATTTCTAATGTTATGACACTGctgaaaaatatttgaatgaaATCGCTGGACTGCTTTTAATGTAGGCGGTTGAGGATTCGTAAGCATGCGAGAGCAATTTGATGATGCTTCTTTTATACTGCTCTACAGCATCACTCTGCATTTGGCACAACTTCAAACTGTAAAAACGAGGGACGGCTAATATCACTGCTTGAATTCAGAGtgtgcaaatatatttattaaaagcaTCGTAAAACTACTAATGGACTGTTTGCATTTTAGTATTTTCATTTCTGTTATGAAtcacttttgtgtgtgtggtcagttAAAATAATGAAAGCATTTCATCATTTTGGTatggttttgtttaatttatttattctttatattcTTTTTGAAGGGCATTTGAAAGTGGGATGGATTAAAATTGGTATgttaataaattactttattaaatgaaa

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0046872 metal ion binding molecular_function
GO:0004222 metalloendopeptidase activity molecular_function
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-417 Predicted to enable metal ion binding activity and metallopeptidase activity. Predicted to act upstream of or within proteolysis. Orthologous to human NRDC (nardilysin convertase).

Ensembl:

ensembl_id ENSDART00000135754

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033282 lncRNA upstream 84331 36742343 ~ 36743912 (+) True XLOC_015712
TCONS_00031290 lncRNA upstream 180692 36646499 ~ 36647551 (+) True XLOC_015708
TCONS_00033612 lncRNA upstream 185481 36638931 ~ 36642762 (+) True XLOC_015707
TCONS_00033611 lncRNA upstream 244968 36521895 ~ 36583275 (+) True XLOC_015702
TCONS_00033281 lncRNA upstream 263770 36552692 ~ 36564473 (+) True XLOC_015705
TCONS_00031301 lncRNA downstream 85442 36939942 ~ 36941479 (+) True XLOC_015717
TCONS_00031310 lncRNA downstream 322350 37176850 ~ 37182269 (+) False XLOC_015720
TCONS_00031311 lncRNA downstream 322383 37176883 ~ 37182269 (+) False XLOC_015720
TCONS_00031320 lncRNA downstream 390937 37245437 ~ 37258241 (+) True XLOC_015723
TCONS_00033613 lncRNA downstream 446908 37301408 ~ 37305390 (+) False XLOC_015725
TCONS_00031293 mRNA upstream 96280 36721357 ~ 36731963 (+) True XLOC_015711
TCONS_00031292 mRNA upstream 106954 36701322 ~ 36721289 (+) True XLOC_015710
TCONS_00031291 mRNA upstream 133099 36691771 ~ 36695144 (+) True XLOC_015709
TCONS_00031289 mRNA upstream 169087 36646451 ~ 36659156 (+) False XLOC_015708
TCONS_00031287 mRNA upstream 191377 36616830 ~ 36636866 (+) False XLOC_015706
TCONS_00031298 mRNA downstream 7973 36862473 ~ 36892883 (+) True XLOC_015715
TCONS_00031299 mRNA downstream 44482 36898982 ~ 36905195 (+) True XLOC_015716
TCONS_00031300 mRNA downstream 85249 36939749 ~ 36941988 (+) False XLOC_015717
TCONS_00031302 mRNA downstream 256004 37110504 ~ 37121162 (+) False XLOC_015718
TCONS_00031303 mRNA downstream 256079 37110579 ~ 37122351 (+) True XLOC_015718
TCONS_00031294 other upstream 74485 36753649 ~ 36753758 (+) True XLOC_015713
TCONS_00031283 other upstream 703426 36124755 ~ 36124817 (+) True XLOC_015701
TCONS_00031282 other upstream 703961 36124223 ~ 36124282 (+) True XLOC_015700
TCONS_00031281 other upstream 704312 36123871 ~ 36123931 (+) True XLOC_015699
TCONS_00031280 other upstream 705128 36123056 ~ 36123115 (+) True XLOC_015698
TCONS_00031307 other downstream 285974 37140474 ~ 37143617 (+) True XLOC_015719
TCONS_00031312 other downstream 337941 37192441 ~ 37201587 (+) True XLOC_015720
TCONS_00031331 other downstream 982119 37836619 ~ 37836920 (+) False XLOC_015734
TCONS_00031335 other downstream 1020271 37874771 ~ 37878304 (+) False XLOC_015735
TCONS_00031374 other downstream 3202399 40056899 ~ 40057016 (+) True XLOC_015768

Expression Profile

//