RNA id: TCONS_00031336



Basic Information


Item Value
RNA id TCONS_00031336
length 888
RNA type mRNA
GC content 0.37
exon number 4
gene id XLOC_015735
representative False

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37874771 ~ 37878304 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


aaagcataaaaacagcacaaatgtgtgcagctttgaaaatgttgGCTACTCAAAATATGCTAATATTGGTGTGTGTCGGGGTCTCACTGGCACATGATTTAATTACACCAGAACAGTTAAAAAACATTGAGGCAAGACTAACAGCCACAGAGGAAACACTGAAAGAACTGAAGAGAGAGAATGAAGctttAAGGATCTTGACAAAGGTCTCGAGTGATAAACTTGAATCAGTGGAAGCAGaaagtaaagCCAAAAAGGTTGCCTTTTCAGCTGGACTTTTGCAATCCGGATCACAAGAATTTGGACCCTTTGAGACTCGAAAGACTctgatttacaaaaaaatctttGCTAATGCTGGAAATGCTTATGACTCCAGCACTGGTATTTTCACAGCACCAGTGAATGGGGTCTATTTCTTCAGATTTTATGCTCATGCTCATCCTACTAAACAAATGGCTGTCAGCCTCCATAAAAATAATCAGATACAATGTTCAGTGTTTTCTCGGCATCCTGCGAGCAATGCTAATGGCAGCAATGGTGTCGTTCTCTCACTGGACAAGGGCGATCAAGTGTTCACACAGCTGTGGGAGAATAACTGGGTGTATGATGATGATCTCAGCTACACCAGTTTCAGCGGCTTTCTGCTTTTCCAGTTGTAATTGTACACAGAATCCAAGATTTAATTagacaaaacaatatttatattactattctcattataatgatattttaatatttttaatgatatATTTACCTCAATGGACACCCAACATTTGCTATCTGTGGACGTTTGTTCACCAAGTTTGTTTTTTCAGATGTGATTATTTTTCCAATGCATAAAATTATATCCTTTtgtaataaaactttttaaacaaatacaaaattgtA

Function


GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070912-288 No description available

Ensembl:

ensembl_id ENSDART00000036318

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00031330 lncRNA upstream 48750 37826734 ~ 37827039 (+) True XLOC_015733
TCONS_00031328 lncRNA upstream 63826 37811030 ~ 37811963 (+) True XLOC_015731
TCONS_00033614 lncRNA upstream 568218 37301424 ~ 37307571 (+) False XLOC_015725
TCONS_00031339 lncRNA downstream 48076 37926380 ~ 37927412 (+) True XLOC_015737
TCONS_00033283 lncRNA downstream 89681 37967985 ~ 37971044 (+) True XLOC_015738
TCONS_00033284 lncRNA downstream 94634 37972938 ~ 37973738 (+) True XLOC_015739
TCONS_00033285 lncRNA downstream 96692 37974996 ~ 37978500 (+) False XLOC_015740
TCONS_00033286 lncRNA downstream 97275 37975579 ~ 37981058 (+) True XLOC_015740
TCONS_00031332 mRNA upstream 28940 37836821 ~ 37846849 (+) False XLOC_015734
TCONS_00031333 mRNA upstream 28940 37837249 ~ 37846849 (+) False XLOC_015734
TCONS_00031334 mRNA upstream 34228 37838259 ~ 37841561 (+) True XLOC_015734
TCONS_00031329 mRNA upstream 51362 37815687 ~ 37824427 (+) True XLOC_015732
TCONS_00031327 mRNA upstream 63604 37804235 ~ 37812185 (+) False XLOC_015731
TCONS_00031338 mRNA downstream 18775 37897079 ~ 37906118 (+) True XLOC_015736
TCONS_00031340 mRNA downstream 93049 37971353 ~ 37974725 (+) False XLOC_015739
TCONS_00031341 mRNA downstream 96722 37975026 ~ 37990505 (+) False XLOC_015740
TCONS_00031342 mRNA downstream 124413 38002717 ~ 38020603 (+) True XLOC_015742
TCONS_00031343 mRNA downstream 146956 38025260 ~ 38034190 (+) True XLOC_015743
TCONS_00031331 other upstream 38869 37836619 ~ 37836920 (+) False XLOC_015734
TCONS_00031312 other upstream 674202 37192441 ~ 37201587 (+) True XLOC_015720
TCONS_00031307 other upstream 732172 37140474 ~ 37143617 (+) True XLOC_015719
TCONS_00031294 other upstream 1122031 36753649 ~ 36753758 (+) True XLOC_015713
TCONS_00031283 other upstream 1750972 36124755 ~ 36124817 (+) True XLOC_015701
TCONS_00031374 other downstream 2178595 40056899 ~ 40057016 (+) True XLOC_015768
TCONS_00031377 other downstream 3157772 41036076 ~ 41036191 (+) True XLOC_015775
TCONS_00031413 other downstream 4545380 42423684 ~ 42423799 (+) True XLOC_015799
TCONS_00031414 other downstream 4708434 42586738 ~ 42587035 (+) True XLOC_015800
TCONS_00031429 other downstream 5120498 42998802 ~ 42998919 (+) True XLOC_015810

Expression Profile


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