Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00033284 |
| length | 725 |
| lncRNA type | sense_over |
| GC content | 0.47 |
| exon number | 2 |
| gene id | XLOC_015739 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 37971353 ~ 37974725 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0032835 | glomerulus development | biological_process |
| GO:0035775 | pronephric glomerulus morphogenesis | biological_process |
| GO:0003094 | glomerular filtration | biological_process |
| GO:0042157 | lipoprotein metabolic process | biological_process |
| GO:0072015 | glomerular visceral epithelial cell development | biological_process |
| GO:0006869 | lipid transport | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008289 | lipid binding | molecular_function |
| id | description |
|---|---|
| ko05143 | African trypanosomiasis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033283 | lncRNA | upstream | 1894 | 37967985 ~ 37971044 (+) | True | XLOC_015738 |
| TCONS_00031339 | lncRNA | upstream | 45526 | 37926380 ~ 37927412 (+) | True | XLOC_015737 |
| TCONS_00031330 | lncRNA | upstream | 145899 | 37826734 ~ 37827039 (+) | True | XLOC_015733 |
| TCONS_00031328 | lncRNA | upstream | 160975 | 37811030 ~ 37811963 (+) | True | XLOC_015731 |
| TCONS_00033615 | lncRNA | upstream | 665367 | 37301522 ~ 37307571 (+) | False | XLOC_015725 |
| TCONS_00033285 | lncRNA | downstream | 1258 | 37974996 ~ 37978500 (+) | False | XLOC_015740 |
| TCONS_00033286 | lncRNA | downstream | 1841 | 37975579 ~ 37981058 (+) | True | XLOC_015740 |
| TCONS_00033287 | lncRNA | downstream | 26041 | 37999779 ~ 38000194 (+) | True | XLOC_015741 |
| TCONS_00033617 | lncRNA | downstream | 307244 | 38280982 ~ 38283096 (+) | True | XLOC_015751 |
| TCONS_00031357 | lncRNA | downstream | 396797 | 38370535 ~ 38371944 (+) | True | XLOC_015753 |
| TCONS_00031338 | mRNA | upstream | 66820 | 37897079 ~ 37906118 (+) | True | XLOC_015736 |
| TCONS_00031336 | mRNA | upstream | 94634 | 37875789 ~ 37878304 (+) | False | XLOC_015735 |
| TCONS_00031337 | mRNA | upstream | 94646 | 37875815 ~ 37878292 (+) | True | XLOC_015735 |
| TCONS_00031333 | mRNA | upstream | 126089 | 37837249 ~ 37846849 (+) | False | XLOC_015734 |
| TCONS_00031341 | mRNA | downstream | 1288 | 37975026 ~ 37990505 (+) | False | XLOC_015740 |
| TCONS_00031342 | mRNA | downstream | 28979 | 38002717 ~ 38020603 (+) | True | XLOC_015742 |
| TCONS_00031343 | mRNA | downstream | 51522 | 38025260 ~ 38034190 (+) | True | XLOC_015743 |
| TCONS_00031344 | mRNA | downstream | 66119 | 38039857 ~ 38054482 (+) | True | XLOC_015744 |
| TCONS_00031345 | mRNA | downstream | 81791 | 38055529 ~ 38066173 (+) | True | XLOC_015745 |
| TCONS_00031335 | other | upstream | 94634 | 37874771 ~ 37878304 (+) | False | XLOC_015735 |
| TCONS_00031331 | other | upstream | 136018 | 37836619 ~ 37836920 (+) | False | XLOC_015734 |
| TCONS_00031312 | other | upstream | 771351 | 37192441 ~ 37201587 (+) | True | XLOC_015720 |
| TCONS_00031307 | other | upstream | 829321 | 37140474 ~ 37143617 (+) | True | XLOC_015719 |
| TCONS_00031294 | other | upstream | 1219180 | 36753649 ~ 36753758 (+) | True | XLOC_015713 |
| TCONS_00031374 | other | downstream | 2083161 | 40056899 ~ 40057016 (+) | True | XLOC_015768 |
| TCONS_00031377 | other | downstream | 3062338 | 41036076 ~ 41036191 (+) | True | XLOC_015775 |
| TCONS_00031413 | other | downstream | 4449946 | 42423684 ~ 42423799 (+) | True | XLOC_015799 |
| TCONS_00031414 | other | downstream | 4613000 | 42586738 ~ 42587035 (+) | True | XLOC_015800 |
| TCONS_00031429 | other | downstream | 5025064 | 42998802 ~ 42998919 (+) | True | XLOC_015810 |
