Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU416140 |
| length | 531 |
| lncRNA type | antisense_over |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G366077 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 9810924 ~ 9811502 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU416103 | lncRNA | downstream | 54209 | 9755440 ~ 9756715 (-) | True | LOC110522838 |
| TU416080 | lncRNA | downstream | 88011 | 9721692 ~ 9722913 (-) | False | G366019 |
| TU416081 | lncRNA | downstream | 88011 | 9721692 ~ 9722913 (-) | False | G366019 |
| TU416082 | lncRNA | downstream | 88011 | 9722376 ~ 9722913 (-) | True | G366019 |
| TU416033 | lncRNA | downstream | 117574 | 9693128 ~ 9693350 (-) | True | G365980 |
| TU416160 | lncRNA | upstream | 37957 | 9849459 ~ 9849785 (-) | True | G366097 |
| TU416171 | lncRNA | upstream | 58916 | 9870418 ~ 9870643 (-) | True | G366107 |
| TU416187 | lncRNA | upstream | 106433 | 9917935 ~ 9918310 (-) | True | G366123 |
| TU416188 | lncRNA | upstream | 107340 | 9918842 ~ 9920142 (-) | True | G366124 |
| TU416206 | lncRNA | upstream | 159460 | 9970962 ~ 9971551 (-) | True | G366140 |
| NM_001165180.1 | mRNA | downstream | 35367 | 9762915 ~ 9775557 (-) | True | reep5 |
| XR_002473370.2 | mRNA | downstream | 53939 | 9755287 ~ 9756985 (-) | False | LOC110522838 |
| XR_005051937.1 | mRNA | downstream | 186185 | 9623770 ~ 9624739 (-) | True | LOC118964744 |
| XM_036976720.1 | mRNA | downstream | 200374 | 9454461 ~ 9610550 (-) | True | pam |
| XM_036976719.1 | mRNA | downstream | 200397 | 9454461 ~ 9610527 (-) | False | pam |
| XM_021601607.2 | mRNA | upstream | 46065 | 9857567 ~ 9869211 (-) | True | zgc:114200 |
| XM_021601617.2 | mRNA | upstream | 67747 | 9879249 ~ 9899368 (-) | False | tpm2 |
| XM_021601619.2 | mRNA | upstream | 67747 | 9879249 ~ 9899369 (-) | False | tpm2 |
| XM_021601612.2 | mRNA | upstream | 67747 | 9879249 ~ 9911220 (-) | False | tpm2 |
| XM_021601615.2 | mRNA | upstream | 67747 | 9879249 ~ 9911220 (-) | False | tpm2 |
| TU415770 | other | downstream | 620826 | 9189669 ~ 9190098 (-) | True | G365752 |
| TU414654 | other | downstream | 760216 | 9047542 ~ 9050708 (-) | False | G364754 |
| TU414159 | other | downstream | 1506741 | 8303267 ~ 8304183 (-) | True | G364322 |
| TU413195 | other | downstream | 3084944 | 6602005 ~ 6725980 (-) | True | LOC110524941 |
| TU413188 | other | downstream | 3259250 | 6543675 ~ 6551674 (-) | True | G363470 |
| TU418958 | other | upstream | 2322550 | 12134052 ~ 12136790 (-) | True | G368612 |
| TU419308 | other | upstream | 2894064 | 12705566 ~ 12706092 (-) | False | G368921 |
| TU419309 | other | upstream | 2894064 | 12705566 ~ 12706092 (-) | True | G368921 |
| TU420894 | other | upstream | 4395688 | 14207190 ~ 14208705 (-) | True | G370333 |
| TU421214 | other | upstream | 4615836 | 14427338 ~ 14428591 (-) | True | G370635 |
