Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU421874 |
| length | 330 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G371206 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 15192949 ~ 15193278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU421776 | lncRNA | upstream | 4995 | 15117198 ~ 15187954 (+) | True | uck1 |
| TU421797 | lncRNA | upstream | 42542 | 15090967 ~ 15150407 (+) | True | G371139 |
| TU421837 | lncRNA | upstream | 90623 | 15080692 ~ 15102326 (+) | True | G371172 |
| TU421835 | lncRNA | upstream | 92571 | 15077707 ~ 15100378 (+) | True | G371171 |
| TU421834 | lncRNA | upstream | 104409 | 15067025 ~ 15088540 (+) | True | G371170 |
| TU422064 | lncRNA | downstream | 62824 | 15256102 ~ 15256318 (+) | True | G371367 |
| TU422121 | lncRNA | downstream | 153850 | 15347128 ~ 15347847 (+) | True | G371420 |
| TU422153 | lncRNA | downstream | 225215 | 15418493 ~ 15418732 (+) | True | G371452 |
| TU422154 | lncRNA | downstream | 225699 | 15418977 ~ 15419301 (+) | True | G371453 |
| TU422155 | lncRNA | downstream | 228002 | 15421280 ~ 15421580 (+) | True | G371454 |
| XM_036976892.1 | mRNA | upstream | 47429 | 15117224 ~ 15145520 (+) | False | uck1 |
| XM_021601872.2 | mRNA | upstream | 47429 | 15138641 ~ 15145520 (+) | False | uck1 |
| XM_036976887.1 | mRNA | upstream | 96192 | 15086878 ~ 15096757 (+) | True | LOC110519478 |
| XM_036976894.1 | mRNA | upstream | 117391 | 15065627 ~ 15075558 (+) | False | LOC110518158 |
| XM_036976895.1 | mRNA | upstream | 138596 | 15047739 ~ 15054353 (+) | False | LOC110519479 |
| XM_036976911.1 | mRNA | downstream | 271277 | 15464555 ~ 15591443 (+) | False | LOC110523300 |
| XM_036976909.1 | mRNA | downstream | 271431 | 15464709 ~ 15591443 (+) | False | LOC110523300 |
| XM_036976910.1 | mRNA | downstream | 271431 | 15464709 ~ 15591443 (+) | True | LOC110523300 |
| XM_036976915.1 | mRNA | downstream | 556913 | 15750191 ~ 15756122 (+) | False | st6galnac4 |
| XM_021601899.2 | mRNA | downstream | 559626 | 15752904 ~ 15756190 (+) | False | st6galnac4 |
| TU421847 | other | upstream | 64132 | 15124290 ~ 15128817 (+) | True | G371182 |
| TU421788 | other | upstream | 139393 | 15048178 ~ 15053556 (+) | True | LOC110519479 |
| TU421530 | other | upstream | 387478 | 14804661 ~ 14805471 (+) | True | LOC118964542 |
| TU420985 | other | upstream | 824788 | 14367672 ~ 14368161 (+) | True | G370414 |
| TU420951 | other | upstream | 867054 | 14321104 ~ 14325895 (+) | True | G370382 |
| TU422347 | other | downstream | 598281 | 15791559 ~ 15795122 (+) | False | G371615 |
| TU423147 | other | downstream | 1026328 | 16219606 ~ 16220933 (+) | True | G372281 |
| TU423245 | other | downstream | 1542364 | 16735642 ~ 16738500 (+) | True | G372373 |
| TU423600 | other | downstream | 1677156 | 16870434 ~ 16882185 (+) | False | G372618 |
| TU423601 | other | downstream | 1677156 | 16870434 ~ 16882185 (+) | True | G372618 |
