Item | Value |
---|---|
RNA id | TU425324 |
length | 270 |
lncRNA type | inter_gene |
GC content | 0.40 |
exon number | 1 |
gene id | G374105 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048569.1 |
NCBI id | CM023223.2 |
chromosome length | 100798064 |
location | 18048939 ~ 18049208 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU425325 | lncRNA | upstream | 14325 | 18033872 ~ 18034614 (+) | True | G374106 |
TU425314 | lncRNA | upstream | 38558 | 18010112 ~ 18010381 (+) | True | G374095 |
TU425313 | lncRNA | upstream | 45786 | 18002824 ~ 18003153 (+) | True | G374094 |
TU425044 | lncRNA | upstream | 94149 | 17912480 ~ 17954790 (+) | False | G373848 |
TU425045 | lncRNA | upstream | 94149 | 17948173 ~ 17954790 (+) | True | G373848 |
TU425384 | lncRNA | downstream | 72183 | 18121391 ~ 18122615 (+) | True | G374157 |
TU425341 | lncRNA | downstream | 130334 | 18179542 ~ 18181098 (+) | False | G374120 |
TU425342 | lncRNA | downstream | 130334 | 18179542 ~ 18181098 (+) | True | G374120 |
TU425539 | lncRNA | downstream | 133271 | 18182479 ~ 18182694 (+) | True | G374291 |
TU425540 | lncRNA | downstream | 133542 | 18182750 ~ 18183159 (+) | True | G374292 |
XM_021601989.2 | mRNA | upstream | 1308 | 18040703 ~ 18047631 (+) | False | btf3 |
XM_021601990.2 | mRNA | upstream | 1308 | 18040727 ~ 18047631 (+) | True | btf3 |
XM_036976541.1 | mRNA | upstream | 118775 | 17900493 ~ 17930164 (+) | True | tmem174 |
XM_021601985.2 | mRNA | upstream | 169714 | 17877617 ~ 17879225 (+) | True | LOC110523359 |
XM_036976977.1 | mRNA | upstream | 177347 | 17791868 ~ 17871592 (+) | False | LOC110523357 |
XM_036976985.1 | mRNA | downstream | 18142 | 18067350 ~ 18177035 (+) | False | arhgef28a |
XM_036976986.1 | mRNA | downstream | 18142 | 18067350 ~ 18177035 (+) | False | arhgef28a |
XM_036976987.1 | mRNA | downstream | 18142 | 18067350 ~ 18177035 (+) | False | arhgef28a |
XM_036976988.1 | mRNA | downstream | 18142 | 18067350 ~ 18177035 (+) | False | arhgef28a |
XR_002473438.2 | mRNA | downstream | 347120 | 18396328 ~ 18410126 (+) | False | LOC110523365 |
TU424889 | other | upstream | 341182 | 17704113 ~ 17707757 (+) | True | G373726 |
TU423600 | other | upstream | 1166754 | 16870434 ~ 16882185 (+) | False | G372618 |
TU423601 | other | upstream | 1166754 | 16870434 ~ 16882185 (+) | True | G372618 |
TU423245 | other | upstream | 1310439 | 16735642 ~ 16738500 (+) | True | G372373 |
TU423147 | other | upstream | 1828006 | 16219606 ~ 16220933 (+) | True | G372281 |
TU425343 | other | downstream | 18235 | 18067443 ~ 18083365 (+) | True | arhgef28a |
TU427802 | other | downstream | 1934053 | 19983261 ~ 19983848 (+) | True | G376320 |
TU428545 | other | downstream | 2542272 | 20591480 ~ 20596863 (+) | True | G377022 |
TU428462 | other | downstream | 2694376 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
TU428679 | other | downstream | 2782050 | 20831258 ~ 20836559 (+) | True | LOC110522817 |