Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU427453 |
| length | 323 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G375980 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 19805729 ~ 19812504 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU427338 | lncRNA | upstream | 183056 | 19621152 ~ 19622673 (+) | True | G375871 |
| TU427337 | lncRNA | upstream | 183642 | 19621070 ~ 19622087 (+) | False | G375871 |
| TU427191 | lncRNA | upstream | 293438 | 19506617 ~ 19512291 (+) | False | LOC110523383 |
| TU427190 | lncRNA | upstream | 293438 | 19506864 ~ 19512291 (+) | False | LOC110523383 |
| TU427186 | lncRNA | upstream | 293438 | 19508621 ~ 19512291 (+) | True | LOC110523383 |
| TU427732 | lncRNA | downstream | 105347 | 19917851 ~ 19918156 (+) | True | G376250 |
| TU427749 | lncRNA | downstream | 114117 | 19926621 ~ 19926821 (+) | True | G376267 |
| TU427769 | lncRNA | downstream | 137572 | 19950076 ~ 19950291 (+) | True | G376287 |
| TU427801 | lncRNA | downstream | 170289 | 19982793 ~ 19983038 (+) | True | G376319 |
| TU427803 | lncRNA | downstream | 172147 | 19984651 ~ 19984987 (+) | True | G376321 |
| XM_021602045.2 | mRNA | upstream | 296664 | 19499604 ~ 19509065 (+) | False | LOC110523383 |
| XM_021602038.2 | mRNA | upstream | 441640 | 19358271 ~ 19364089 (+) | True | LOC110523377 |
| XM_036976994.1 | mRNA | upstream | 1227501 | 18558152 ~ 18578228 (+) | False | LOC110523370 |
| XM_036977015.1 | mRNA | downstream | 238889 | 20051393 ~ 20381619 (+) | False | LOC110523391 |
| XM_036977012.1 | mRNA | downstream | 238894 | 20051398 ~ 20264903 (+) | False | LOC110523391 |
| XM_036977013.1 | mRNA | downstream | 238894 | 20051398 ~ 20264903 (+) | False | LOC110523391 |
| XM_036977014.1 | mRNA | downstream | 238895 | 20051399 ~ 20264903 (+) | True | LOC110523391 |
| XM_021602055.2 | mRNA | downstream | 578026 | 20390530 ~ 20414156 (+) | True | LOC110523393 |
| TU425343 | other | upstream | 1722364 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU424889 | other | upstream | 2097972 | 17704113 ~ 17707757 (+) | True | G373726 |
| TU423600 | other | upstream | 2923544 | 16870434 ~ 16882185 (+) | False | G372618 |
| TU423601 | other | upstream | 2923544 | 16870434 ~ 16882185 (+) | True | G372618 |
| TU423245 | other | upstream | 3067229 | 16735642 ~ 16738500 (+) | True | G372373 |
| TU427802 | other | downstream | 170757 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU428545 | other | downstream | 778976 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU428462 | other | downstream | 931080 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428679 | other | downstream | 1018754 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428818 | other | downstream | 1295665 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
