Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428589 |
| length | 240 |
| lncRNA type | intronic |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G377065 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20651832 ~ 20652071 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428587 | lncRNA | upstream | 2503 | 20649037 ~ 20649329 (+) | True | G377063 |
| TU428586 | lncRNA | upstream | 3643 | 20647908 ~ 20648189 (+) | True | G377062 |
| TU428580 | lncRNA | upstream | 12369 | 20639198 ~ 20639463 (+) | True | G377057 |
| TU428524 | lncRNA | upstream | 78771 | 20572407 ~ 20573061 (+) | True | G377004 |
| TU428518 | lncRNA | upstream | 84289 | 20567292 ~ 20567543 (+) | True | G376999 |
| TU428596 | lncRNA | downstream | 9281 | 20661352 ~ 20661558 (+) | True | G377071 |
| TU428603 | lncRNA | downstream | 14976 | 20667047 ~ 20667366 (+) | True | G377078 |
| TU428606 | lncRNA | downstream | 23177 | 20675248 ~ 20675448 (+) | True | G377081 |
| TU428609 | lncRNA | downstream | 28427 | 20680498 ~ 20680786 (+) | True | G377084 |
| TU428616 | lncRNA | downstream | 32042 | 20684113 ~ 20684315 (+) | True | G377091 |
| XM_021602055.2 | mRNA | upstream | 237676 | 20390530 ~ 20414156 (+) | True | LOC110523393 |
| XM_036977015.1 | mRNA | upstream | 270213 | 20051393 ~ 20381619 (+) | False | LOC110523391 |
| XM_036977021.1 | mRNA | downstream | 19054 | 20671125 ~ 20759255 (+) | False | LOC110522816 |
| XM_036977023.1 | mRNA | downstream | 179040 | 20831111 ~ 20842676 (+) | False | LOC110522817 |
| XM_021601313.2 | mRNA | downstream | 206271 | 20858342 ~ 20859762 (+) | True | pnx |
| XM_036977024.1 | mRNA | downstream | 229867 | 20881938 ~ 20897867 (+) | True | LOC110522818 |
| XM_021602058.2 | mRNA | downstream | 246050 | 20898121 ~ 20910637 (+) | True | LOC110523395 |
| TU428545 | other | upstream | 54969 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 667984 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU425343 | other | upstream | 2568467 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU424889 | other | upstream | 2944075 | 17704113 ~ 17707757 (+) | True | G373726 |
| TU423601 | other | upstream | 3769647 | 16870434 ~ 16882185 (+) | True | G372618 |
| TU428462 | other | downstream | 91513 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428679 | other | downstream | 179187 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428818 | other | downstream | 456098 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU430417 | other | downstream | 1520464 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 1520464 | 22172535 ~ 22231920 (+) | True | G378660 |
