Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428632 |
| length | 223 |
| lncRNA type | intronic |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G377106 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20708923 ~ 20709145 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428631 | lncRNA | upstream | 3026 | 20705691 ~ 20705897 (+) | True | G377105 |
| TU428625 | lncRNA | upstream | 6709 | 20697194 ~ 20702214 (+) | True | G377099 |
| TU428616 | lncRNA | upstream | 24608 | 20684113 ~ 20684315 (+) | True | G377091 |
| TU428609 | lncRNA | upstream | 28137 | 20680498 ~ 20680786 (+) | True | G377084 |
| TU428606 | lncRNA | upstream | 33475 | 20675248 ~ 20675448 (+) | True | G377081 |
| TU428633 | lncRNA | downstream | 378 | 20709523 ~ 20742643 (+) | True | G377107 |
| TU428651 | lncRNA | downstream | 50601 | 20759746 ~ 20760016 (+) | False | G377125 |
| TU428652 | lncRNA | downstream | 50601 | 20759746 ~ 20760485 (+) | True | G377125 |
| TU428675 | lncRNA | downstream | 90916 | 20800061 ~ 20846940 (+) | False | G377143 |
| TU428677 | lncRNA | downstream | 136157 | 20845302 ~ 20846940 (+) | True | G377143 |
| XM_021602055.2 | mRNA | upstream | 294767 | 20390530 ~ 20414156 (+) | True | LOC110523393 |
| XM_036977015.1 | mRNA | upstream | 327304 | 20051393 ~ 20381619 (+) | False | LOC110523391 |
| XM_036977023.1 | mRNA | downstream | 121966 | 20831111 ~ 20842676 (+) | False | LOC110522817 |
| XM_021601313.2 | mRNA | downstream | 149197 | 20858342 ~ 20859762 (+) | True | pnx |
| XM_036977024.1 | mRNA | downstream | 172793 | 20881938 ~ 20897867 (+) | True | LOC110522818 |
| XM_021602058.2 | mRNA | downstream | 188976 | 20898121 ~ 20910637 (+) | True | LOC110523395 |
| XM_021602060.2 | mRNA | downstream | 213869 | 20923014 ~ 20944043 (+) | False | ccar2 |
| TU428545 | other | upstream | 112060 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 725075 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU425343 | other | upstream | 2625558 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU424889 | other | upstream | 3001166 | 17704113 ~ 17707757 (+) | True | G373726 |
| TU423601 | other | upstream | 3826738 | 16870434 ~ 16882185 (+) | True | G372618 |
| TU428462 | other | downstream | 34439 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428679 | other | downstream | 122113 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428818 | other | downstream | 399024 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU430417 | other | downstream | 1463390 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 1463390 | 22172535 ~ 22231920 (+) | True | G378660 |
