RNA id: TCONS_00031414



Basic Information


Item Value
RNA id TCONS_00031414
length 298
RNA type ribozyme
GC content 0.50
exon number 1
gene id XLOC_015800
representative True

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42586738 ~ 42587035 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GTGGTAGGAAGTTCACTGTAGAGGTTACAAACTGAGTGTTCATCACTATGCATTCACCTCGGGGAAGGTCTGAGACATGAGCCAATCGCTGCTCTAGCAGGGCATCATCTGAATGATGAGCGAGTGCACAGACACGTGGGTCACACTGTGGTGTTTCGCACGAGACGTTGATTTGCAAAATAGCTAATCAATCGATGCGATCCCAGTTGATTTGGAAACACTCGCGGCTGGCGGATTGAGTTCGATGTGTGAACCAGCGCTACGGGCTGGAACCCAATTCAGACTACTCTCCTACCAC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000120897

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033638 lncRNA upstream 164094 42410888 ~ 42422644 (+) False XLOC_015798
TCONS_00033639 lncRNA upstream 164094 42419803 ~ 42422644 (+) True XLOC_015798
TCONS_00031392 lncRNA upstream 404358 42176922 ~ 42182380 (+) False XLOC_015787
TCONS_00033295 lncRNA upstream 573388 42013076 ~ 42013350 (+) True XLOC_015783
TCONS_00031384 lncRNA upstream 704578 41876622 ~ 41882160 (+) True XLOC_015780
TCONS_00033640 lncRNA downstream 29826 42616861 ~ 42624890 (+) True XLOC_015802
TCONS_00033296 lncRNA downstream 58353 42645388 ~ 42645994 (+) True XLOC_015803
TCONS_00031425 lncRNA downstream 186314 42773349 ~ 42774516 (+) False XLOC_015807
TCONS_00031426 lncRNA downstream 186349 42773384 ~ 42781254 (+) True XLOC_015807
TCONS_00033641 lncRNA downstream 385892 42972927 ~ 43010381 (+) True XLOC_015809
TCONS_00031412 mRNA upstream 241167 42344304 ~ 42345571 (+) True XLOC_015797
TCONS_00031411 mRNA upstream 253027 42330828 ~ 42333711 (+) True XLOC_015793
TCONS_00031410 mRNA upstream 253509 42330828 ~ 42333229 (+) False XLOC_015793
TCONS_00031409 mRNA upstream 265584 42318012 ~ 42321154 (+) True XLOC_015796
TCONS_00031408 mRNA upstream 278314 42294944 ~ 42308424 (+) True XLOC_015795
TCONS_00031415 mRNA downstream 5537 42592572 ~ 42600113 (+) False XLOC_015801
TCONS_00031416 mRNA downstream 5816 42592851 ~ 42600087 (+) True XLOC_015801
TCONS_00031417 mRNA downstream 121639 42708674 ~ 42710206 (+) False XLOC_015804
TCONS_00031418 mRNA downstream 121649 42708684 ~ 42713902 (+) True XLOC_015804
TCONS_00031419 mRNA downstream 128960 42715995 ~ 42717210 (+) False XLOC_015805
TCONS_00031413 other upstream 162939 42423684 ~ 42423799 (+) True XLOC_015799
TCONS_00031377 other upstream 1550547 41036076 ~ 41036191 (+) True XLOC_015775
TCONS_00031374 other upstream 2529722 40056899 ~ 40057016 (+) True XLOC_015768
TCONS_00031335 other upstream 4708434 37874771 ~ 37878304 (+) False XLOC_015735
TCONS_00031331 other upstream 4749818 37836619 ~ 37836920 (+) False XLOC_015734
TCONS_00031429 other downstream 411767 42998802 ~ 42998919 (+) True XLOC_015810
TCONS_00031434 other downstream 692566 43279601 ~ 43303082 (+) True XLOC_015812
TCONS_00031447 other downstream 1765638 44352673 ~ 44353567 (+) False XLOC_015820
TCONS_00031458 other downstream 1977343 44564378 ~ 44564494 (+) True XLOC_015827
TCONS_00031468 other downstream 2336764 44923799 ~ 44924676 (+) True XLOC_015830

Expression Profile


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