Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428729 |
| length | 382 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G377186 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 20914152 ~ 20914533 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428678 | lncRNA | upstream | 63012 | 20849654 ~ 20851140 (+) | True | G377144 |
| TU428675 | lncRNA | upstream | 67212 | 20800061 ~ 20846940 (+) | False | G377143 |
| TU428677 | lncRNA | upstream | 67212 | 20845302 ~ 20846940 (+) | True | G377143 |
| TU428652 | lncRNA | upstream | 153667 | 20759746 ~ 20760485 (+) | True | G377125 |
| TU428651 | lncRNA | upstream | 154136 | 20759746 ~ 20760016 (+) | False | G377125 |
| TU428738 | lncRNA | downstream | 2654 | 20917187 ~ 20917779 (+) | True | G377195 |
| TU428740 | lncRNA | downstream | 6602 | 20921135 ~ 20921358 (+) | True | G377197 |
| TU428741 | lncRNA | downstream | 7344 | 20921877 ~ 20922095 (+) | True | G377198 |
| TU428725 | lncRNA | downstream | 29059 | 20943592 ~ 20944038 (+) | True | ccar2 |
| TU428731 | lncRNA | downstream | 31996 | 20946529 ~ 20992976 (+) | True | G377188 |
| XM_021602058.2 | mRNA | upstream | 3515 | 20898121 ~ 20910637 (+) | True | LOC110523395 |
| XM_036977024.1 | mRNA | upstream | 16285 | 20881938 ~ 20897867 (+) | True | LOC110522818 |
| XM_021601313.2 | mRNA | upstream | 54390 | 20858342 ~ 20859762 (+) | True | pnx |
| XM_036977023.1 | mRNA | upstream | 71476 | 20831111 ~ 20842676 (+) | False | LOC110522817 |
| XM_036977018.1 | mRNA | upstream | 154897 | 20536136 ~ 20759255 (+) | False | LOC110522816 |
| XM_021602060.2 | mRNA | downstream | 8481 | 20923014 ~ 20944043 (+) | False | ccar2 |
| XM_021602061.2 | mRNA | downstream | 9136 | 20923669 ~ 20944043 (+) | False | ccar2 |
| XM_036977025.1 | mRNA | downstream | 9136 | 20923669 ~ 20944043 (+) | False | ccar2 |
| XM_021602063.2 | mRNA | downstream | 37616 | 20952149 ~ 20991341 (+) | False | LOC110523398 |
| XM_021602064.2 | mRNA | downstream | 37616 | 20952149 ~ 20991376 (+) | False | LOC110523398 |
| TU428679 | other | upstream | 77593 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428462 | other | upstream | 155651 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428545 | other | upstream | 317289 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 930304 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU425343 | other | upstream | 2830787 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU428818 | other | downstream | 193636 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU430417 | other | downstream | 1258002 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 1258002 | 22172535 ~ 22231920 (+) | True | G378660 |
| TU430626 | other | downstream | 1589219 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU430672 | other | downstream | 1687577 | 22602110 ~ 22629669 (+) | True | G378868 |
