Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428824 |
| length | 209 |
| lncRNA type | intronic |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G377272 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21071374 ~ 21071582 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428812 | lncRNA | upstream | 27378 | 21043689 ~ 21043996 (+) | True | G377261 |
| TU428798 | lncRNA | upstream | 36858 | 21033942 ~ 21034516 (+) | True | G377251 |
| TU428790 | lncRNA | upstream | 46106 | 21024964 ~ 21025268 (+) | True | G377243 |
| TU428788 | lncRNA | upstream | 48005 | 21022705 ~ 21023369 (+) | True | G377241 |
| TU428787 | lncRNA | upstream | 51467 | 21019662 ~ 21019907 (+) | True | G377240 |
| TU428805 | lncRNA | downstream | 28749 | 21100331 ~ 21103100 (+) | True | G377255 |
| TU428844 | lncRNA | downstream | 41312 | 21112894 ~ 21125541 (+) | True | G377292 |
| TU428847 | lncRNA | downstream | 75749 | 21147331 ~ 21151990 (+) | False | G377293 |
| TU428848 | lncRNA | downstream | 75749 | 21147331 ~ 21150450 (+) | True | G377293 |
| TU428849 | lncRNA | downstream | 80832 | 21152414 ~ 21153105 (+) | True | G377294 |
| XM_021602064.2 | mRNA | upstream | 79998 | 20952149 ~ 20991376 (+) | False | LOC110523398 |
| XM_021602063.2 | mRNA | upstream | 80033 | 20952149 ~ 20991341 (+) | False | LOC110523398 |
| XM_021602062.2 | mRNA | upstream | 88971 | 20952150 ~ 20982403 (+) | False | LOC110523398 |
| XM_021602065.2 | mRNA | upstream | 88973 | 20952166 ~ 20982401 (+) | True | LOC110523398 |
| XM_021602060.2 | mRNA | upstream | 127331 | 20923014 ~ 20944043 (+) | False | ccar2 |
| XM_021602067.2 | mRNA | downstream | 36547 | 21108129 ~ 21160140 (+) | False | LOC110523400 |
| XM_021602076.2 | mRNA | downstream | 205986 | 21277568 ~ 21288531 (+) | True | npm2b |
| XM_021602081.2 | mRNA | downstream | 402271 | 21473853 ~ 21477171 (+) | True | LOC110523406 |
| XM_036977038.1 | mRNA | downstream | 407103 | 21478685 ~ 21493435 (+) | False | LOC110523407 |
| XM_036977039.1 | mRNA | downstream | 407118 | 21478700 ~ 21493435 (+) | True | LOC110523407 |
| TU428679 | other | upstream | 234815 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428462 | other | upstream | 312873 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428545 | other | upstream | 474511 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 1087526 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU425343 | other | upstream | 2988009 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU428818 | other | downstream | 36587 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU430417 | other | downstream | 1100953 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 1100953 | 22172535 ~ 22231920 (+) | True | G378660 |
| TU430626 | other | downstream | 1432170 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU430672 | other | downstream | 1530528 | 22602110 ~ 22629669 (+) | True | G378868 |
