Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428849 |
| length | 308 |
| lncRNA type | intronic |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G377294 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21152414 ~ 21153105 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428847 | lncRNA | upstream | 424 | 21147331 ~ 21151990 (+) | False | G377293 |
| TU428848 | lncRNA | upstream | 1964 | 21147331 ~ 21150450 (+) | True | G377293 |
| TU428844 | lncRNA | upstream | 26873 | 21112894 ~ 21125541 (+) | True | G377292 |
| TU428805 | lncRNA | upstream | 49314 | 21100331 ~ 21103100 (+) | True | G377255 |
| TU428824 | lncRNA | upstream | 80832 | 21071374 ~ 21071582 (+) | True | G377272 |
| TU428819 | lncRNA | downstream | 6026 | 21159131 ~ 21160092 (+) | False | LOC110523400 |
| TU428820 | lncRNA | downstream | 6026 | 21159131 ~ 21160149 (+) | True | LOC110523400 |
| TU428854 | lncRNA | downstream | 7694 | 21160799 ~ 21161204 (+) | True | G377299 |
| TU428856 | lncRNA | downstream | 9349 | 21162454 ~ 21162971 (+) | True | G377301 |
| TU428858 | lncRNA | downstream | 12024 | 21165129 ~ 21165486 (+) | True | G377303 |
| XM_036977026.1 | mRNA | upstream | 53125 | 21050936 ~ 21099289 (+) | True | LOC110522819 |
| XM_021602064.2 | mRNA | upstream | 161038 | 20952149 ~ 20991376 (+) | False | LOC110523398 |
| XM_021602063.2 | mRNA | upstream | 161073 | 20952149 ~ 20991341 (+) | False | LOC110523398 |
| XM_021602076.2 | mRNA | downstream | 124463 | 21277568 ~ 21288531 (+) | True | npm2b |
| XM_021602081.2 | mRNA | downstream | 320748 | 21473853 ~ 21477171 (+) | True | LOC110523406 |
| XM_036977038.1 | mRNA | downstream | 325580 | 21478685 ~ 21493435 (+) | False | LOC110523407 |
| XM_036977039.1 | mRNA | downstream | 325595 | 21478700 ~ 21493435 (+) | True | LOC110523407 |
| XM_021602086.2 | mRNA | downstream | 365452 | 21518557 ~ 21521828 (+) | True | LOC110523409 |
| TU428679 | other | upstream | 315855 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428462 | other | upstream | 393913 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428545 | other | upstream | 555551 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 1168566 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU425343 | other | upstream | 3069049 | 18067443 ~ 18083365 (+) | True | arhgef28a |
| TU430417 | other | downstream | 1019430 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 1019430 | 22172535 ~ 22231920 (+) | True | G378660 |
| TU430626 | other | downstream | 1350647 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU430672 | other | downstream | 1449005 | 22602110 ~ 22629669 (+) | True | G378868 |
| TU430848 | other | downstream | 1789187 | 22942292 ~ 23007287 (+) | True | lhfpl2a |
