Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU428879 |
| length | 265 |
| lncRNA type | intronic |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G377322 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21203322 ~ 21203616 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU428858 | lncRNA | upstream | 37836 | 21165129 ~ 21165486 (+) | True | G377303 |
| TU428856 | lncRNA | upstream | 40351 | 21162454 ~ 21162971 (+) | True | G377301 |
| TU428854 | lncRNA | upstream | 42118 | 21160799 ~ 21161204 (+) | True | G377299 |
| TU428820 | lncRNA | upstream | 43173 | 21159131 ~ 21160149 (+) | True | LOC110523400 |
| TU428819 | lncRNA | upstream | 43230 | 21159131 ~ 21160092 (+) | False | LOC110523400 |
| TU428919 | lncRNA | downstream | 89786 | 21293402 ~ 21294594 (+) | True | G377356 |
| TU428923 | lncRNA | downstream | 102046 | 21305662 ~ 21306274 (+) | True | G377360 |
| TU428942 | lncRNA | downstream | 111025 | 21314641 ~ 21315084 (+) | True | G377371 |
| TU428929 | lncRNA | downstream | 112061 | 21315677 ~ 21362051 (+) | False | G377363 |
| TU428930 | lncRNA | downstream | 112061 | 21315677 ~ 21362051 (+) | False | G377363 |
| XM_021602067.2 | mRNA | upstream | 43182 | 21108129 ~ 21160140 (+) | False | LOC110523400 |
| XM_036977026.1 | mRNA | upstream | 104033 | 21050936 ~ 21099289 (+) | True | LOC110522819 |
| XM_021602064.2 | mRNA | upstream | 211946 | 20952149 ~ 20991376 (+) | False | LOC110523398 |
| XM_021602076.2 | mRNA | downstream | 73952 | 21277568 ~ 21288531 (+) | True | npm2b |
| XM_021602081.2 | mRNA | downstream | 270237 | 21473853 ~ 21477171 (+) | True | LOC110523406 |
| XM_036977038.1 | mRNA | downstream | 275069 | 21478685 ~ 21493435 (+) | False | LOC110523407 |
| XM_036977039.1 | mRNA | downstream | 275084 | 21478700 ~ 21493435 (+) | True | LOC110523407 |
| XM_021602086.2 | mRNA | downstream | 314941 | 21518557 ~ 21521828 (+) | True | LOC110523409 |
| TU428818 | other | upstream | 44403 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU428679 | other | upstream | 366763 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428462 | other | upstream | 444821 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428545 | other | upstream | 606459 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 1219474 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU430417 | other | downstream | 968919 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 968919 | 22172535 ~ 22231920 (+) | True | G378660 |
| TU430626 | other | downstream | 1300136 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU430672 | other | downstream | 1398494 | 22602110 ~ 22629669 (+) | True | G378868 |
| TU430848 | other | downstream | 1738676 | 22942292 ~ 23007287 (+) | True | lhfpl2a |
