Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU429286 |
| length | 695 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G377658 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 21849499 ~ 21850193 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU429278 | lncRNA | upstream | 14459 | 21834717 ~ 21835040 (+) | True | G377650 |
| TU429270 | lncRNA | upstream | 26649 | 21821582 ~ 21822850 (+) | True | LOC110523421 |
| TU429256 | lncRNA | upstream | 57690 | 21791502 ~ 21791809 (+) | True | G377630 |
| TU429255 | lncRNA | upstream | 58071 | 21790878 ~ 21791428 (+) | True | G377629 |
| TU429254 | lncRNA | upstream | 58701 | 21790581 ~ 21790798 (+) | True | G377628 |
| TU429284 | lncRNA | downstream | 3990 | 21854183 ~ 21854828 (+) | True | G377656 |
| TU430127 | lncRNA | downstream | 10401 | 21860594 ~ 21865869 (+) | True | G378403 |
| TU430130 | lncRNA | downstream | 15795 | 21865988 ~ 21866406 (+) | True | G378406 |
| TU430134 | lncRNA | downstream | 16869 | 21867062 ~ 21867445 (+) | True | G378410 |
| TU430155 | lncRNA | downstream | 44848 | 21895041 ~ 21895265 (+) | True | G378431 |
| XM_021602099.2 | mRNA | upstream | 2262 | 21842068 ~ 21847237 (+) | True | LOC110523423 |
| XM_036977050.1 | mRNA | upstream | 26622 | 21816778 ~ 21822877 (+) | False | LOC110523421 |
| XM_036977049.1 | mRNA | upstream | 26622 | 21816785 ~ 21822877 (+) | False | LOC110523421 |
| XM_036977048.1 | mRNA | upstream | 40575 | 21798340 ~ 21808924 (+) | True | LOC110523420 |
| XM_036977047.1 | mRNA | upstream | 79599 | 21765709 ~ 21769900 (+) | False | LOC110523419 |
| XM_021602100.2 | mRNA | downstream | 103890 | 21954083 ~ 21958510 (+) | True | LOC110523424 |
| LOC110522824 | mRNA | downstream | 111282 | 21961475 ~ 21990926 (+) | True | LOC110522824 |
| NM_001124290.1 | mRNA | downstream | 147463 | 21997656 ~ 22000508 (+) | True | LOC100135946 |
| XM_021602110.2 | mRNA | downstream | 195778 | 22045971 ~ 22053104 (+) | True | LOC110523429 |
| XM_036977053.1 | mRNA | downstream | 340175 | 22190368 ~ 22221369 (+) | False | LOC110523432 |
| TU428818 | other | upstream | 690580 | 21108169 ~ 21158919 (+) | False | LOC110523400 |
| TU428679 | other | upstream | 1012940 | 20831258 ~ 20836559 (+) | True | LOC110522817 |
| TU428462 | other | upstream | 1090998 | 20743584 ~ 20758501 (+) | True | LOC110522816 |
| TU428545 | other | upstream | 1252636 | 20591480 ~ 20596863 (+) | True | G377022 |
| TU427802 | other | upstream | 1865651 | 19983261 ~ 19983848 (+) | True | G376320 |
| TU430417 | other | downstream | 322342 | 22172535 ~ 22231920 (+) | False | G378660 |
| TU430418 | other | downstream | 322342 | 22172535 ~ 22231920 (+) | True | G378660 |
| TU430626 | other | downstream | 653559 | 22503752 ~ 22506270 (+) | True | G378832 |
| TU430672 | other | downstream | 751917 | 22602110 ~ 22629669 (+) | True | G378868 |
| TU430848 | other | downstream | 1092099 | 22942292 ~ 23007287 (+) | True | lhfpl2a |
