Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU432387 |
| length | 723 |
| lncRNA type | antisense_over |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G380372 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 23807214 ~ 23807936 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU432345 | lncRNA | upstream | 41370 | 23763779 ~ 23765844 (+) | True | G380336 |
| TU432374 | lncRNA | upstream | 43691 | 23763303 ~ 23763523 (+) | True | G380365 |
| TU432372 | lncRNA | upstream | 44806 | 23762021 ~ 23762408 (+) | True | G380363 |
| TU432366 | lncRNA | upstream | 53737 | 23753221 ~ 23753477 (+) | True | G380357 |
| TU432347 | lncRNA | upstream | 59936 | 23741825 ~ 23747278 (+) | True | LOC118964576 |
| TU432451 | lncRNA | downstream | 140657 | 23948593 ~ 23948796 (+) | True | G380431 |
| TU432453 | lncRNA | downstream | 145123 | 23953059 ~ 23953354 (+) | True | G380433 |
| TU432454 | lncRNA | downstream | 146286 | 23954222 ~ 23982341 (+) | True | G380434 |
| TU432477 | lncRNA | downstream | 174515 | 23982451 ~ 23982673 (+) | True | G380457 |
| TU432481 | lncRNA | downstream | 184143 | 23992079 ~ 23992280 (+) | True | G380461 |
| XR_005051685.1 | mRNA | upstream | 59902 | 23738704 ~ 23747312 (+) | False | LOC118964576 |
| XM_021602162.2 | mRNA | upstream | 71746 | 23713080 ~ 23735468 (+) | False | LOC110523463 |
| XM_021602163.2 | mRNA | upstream | 71746 | 23724027 ~ 23735468 (+) | True | LOC110523463 |
| NM_001165176.2 | mRNA | upstream | 95337 | 23709843 ~ 23711877 (+) | True | vatg1 |
| XM_036977087.1 | mRNA | upstream | 129176 | 23623925 ~ 23678038 (+) | False | LOC110522832 |
| XM_021602173.2 | mRNA | downstream | 30566 | 23838502 ~ 23842045 (+) | False | LOC110523468 |
| XM_021602178.2 | mRNA | downstream | 40282 | 23848218 ~ 23853553 (+) | False | stard4 |
| XM_021602175.2 | mRNA | downstream | 40300 | 23848236 ~ 23853553 (+) | False | stard4 |
| XM_021602174.2 | mRNA | downstream | 40302 | 23848238 ~ 23853553 (+) | False | stard4 |
| XM_021602177.2 | mRNA | downstream | 40302 | 23848238 ~ 23853553 (+) | True | stard4 |
| TU432349 | other | upstream | 65755 | 23740434 ~ 23741459 (+) | True | G380340 |
| TU432291 | other | upstream | 170123 | 23623964 ~ 23637091 (+) | False | LOC110522832 |
| TU432292 | other | upstream | 170123 | 23634021 ~ 23637091 (+) | True | LOC110522832 |
| TU430848 | other | upstream | 799927 | 22942292 ~ 23007287 (+) | True | lhfpl2a |
| TU430672 | other | upstream | 1177545 | 22602110 ~ 22629669 (+) | True | G378868 |
| TU432379 | other | downstream | 30588 | 23838524 ~ 23843711 (+) | False | LOC110523468 |
| TU432380 | other | downstream | 30588 | 23838524 ~ 23842716 (+) | False | LOC110523468 |
| TU432381 | other | downstream | 30588 | 23838524 ~ 23844345 (+) | False | LOC110523468 |
| TU432383 | other | downstream | 30588 | 23838524 ~ 23843846 (+) | True | LOC110523468 |
| TU433317 | other | downstream | 879803 | 24687739 ~ 24776429 (+) | True | G381239 |
