RNA id: TU432999



Basic Information


Item Value
RNA id TU432999
length 205
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G380946
representative True

Chromosome Information


Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 24241605 ~ 24241809 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aacacagggttagcagatgttaacgcgagtgtagcgaaatgcttgtgcttctagttccgacagtgcagaaatatctaacaagtaatctaacaattccacaactacctaatgcacacacatctaaagggatggaataagtacatataaatatatggatgagtgatggcagagcagcataggcaaaaTTCAATAGATGGTAtactat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU432983 lncRNA upstream 11183 24230152 ~ 24230422 (+) True G380930
TU432958 lncRNA upstream 26568 24214786 ~ 24215037 (+) True G380905
TU432544 lncRNA upstream 119879 24120867 ~ 24121726 (+) False G380524
TU432545 lncRNA upstream 119879 24121404 ~ 24121726 (+) True G380524
TU432502 lncRNA upstream 211232 24030133 ~ 24030373 (+) True G380482
TU433066 lncRNA downstream 82547 24324356 ~ 24324600 (+) True G381009
TU433076 lncRNA downstream 91726 24333535 ~ 24333734 (+) True G381019
TU433102 lncRNA downstream 125030 24366839 ~ 24367046 (+) True G381045
TU433104 lncRNA downstream 127648 24369457 ~ 24369735 (+) True G381047
TU433105 lncRNA downstream 128513 24370322 ~ 24370555 (+) True G381048
XM_021602186.2 mRNA upstream 159651 24040148 ~ 24081954 (+) False zmp:0000000846
XM_021602200.2 mRNA downstream 212263 24454072 ~ 24473605 (+) False LOC110523479
XM_036977107.1 mRNA downstream 212844 24454653 ~ 24473605 (+) False LOC110523479
XM_021602201.2 mRNA downstream 212845 24454654 ~ 24473605 (+) False LOC110523479
XM_021602216.2 mRNA downstream 393894 24635703 ~ 24644012 (+) True LOC110523483
trnaa-ugc-9 mRNA downstream 462906 24704715 ~ 24704786 (+) True trnaa-ugc-9
TU432381 other upstream 397260 23838524 ~ 23844345 (+) False LOC110523468
TU432383 other upstream 397759 23838524 ~ 23843846 (+) True LOC110523468
TU432379 other upstream 397894 23838524 ~ 23843711 (+) False LOC110523468
TU432380 other upstream 398889 23838524 ~ 23842716 (+) False LOC110523468
TU432349 other upstream 500146 23740434 ~ 23741459 (+) True G380340
TU433317 other downstream 445930 24687739 ~ 24776429 (+) True G381239
TU434321 other downstream 983633 25225442 ~ 25225730 (+) True G382186
TU434985 other downstream 1933136 26174945 ~ 26186690 (+) True LOC110523503
TU435241 other downstream 2195810 26437619 ~ 26460696 (+) False LOC110522865
TU435244 other downstream 2195850 26437659 ~ 26460535 (+) True LOC110522865

Expression Profile