Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00031450 |
| length | 1128 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 12 |
| gene id | XLOC_015824 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 44426609 ~ 44510752 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:1901379 | regulation of potassium ion transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0006813 | potassium ion transport | biological_process |
| GO:1902260 | negative regulation of delayed rectifier potassium channel activity | biological_process |
| GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane | cellular_component |
| GO:0044224 | juxtaparanode region of axon | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008076 | voltage-gated potassium channel complex | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004033 | aldo-keto reductase (NADP) activity | molecular_function |
| GO:0005249 | voltage-gated potassium channel activity | molecular_function |
| GO:0044325 | ion channel binding | molecular_function |
| GO:0015459 | potassium channel regulator activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-070912-690 | Predicted to enable aldo-keto reductase (NADP) activity; potassium channel regulator activity; and transmembrane transporter binding activity. Predicted to be involved in negative regulation of delayed rectifier potassium channel activity. Predicted to act upstream of or within potassium ion transport; regulation of ion transmembrane transport; and transmembrane transport. Predicted to be located in cytoplasm and plasma membrane. Predicted to be integral component of membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in juxtaparanode region of axon. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. Is expressed in female organism. Human ortholog(s) of this gene implicated in temporal lobe epilepsy. Orthologous to human KCNAB1 (potassium voltage-gated channel subfamily A regulatory beta subunit 1). |
| ensembl_id | ENSDART00000112711 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00033655 | lncRNA | upstream | 25941 | 44395314 ~ 44400668 (+) | True | XLOC_015823 |
| TCONS_00031449 | lncRNA | upstream | 39916 | 44373221 ~ 44386693 (+) | True | XLOC_015821 |
| TCONS_00033654 | lncRNA | upstream | 41371 | 44383172 ~ 44385238 (+) | True | XLOC_015822 |
| TCONS_00031448 | lncRNA | upstream | 64998 | 44360966 ~ 44361611 (+) | True | XLOC_015820 |
| TCONS_00033653 | lncRNA | upstream | 490477 | 43935376 ~ 43936132 (+) | True | XLOC_015819 |
| TCONS_00033656 | lncRNA | downstream | 474654 | 44984483 ~ 44989293 (+) | True | XLOC_015832 |
| TCONS_00033657 | lncRNA | downstream | 922753 | 45432582 ~ 45433628 (+) | True | XLOC_015843 |
| TCONS_00033297 | lncRNA | downstream | 951304 | 45461133 ~ 45461974 (+) | True | XLOC_015846 |
| TCONS_00033298 | lncRNA | downstream | 958238 | 45468067 ~ 45468585 (+) | True | XLOC_015847 |
| TCONS_00033658 | lncRNA | downstream | 1546977 | 46056806 ~ 46060001 (+) | True | XLOC_015862 |
| TCONS_00031446 | mRNA | upstream | 63666 | 44348490 ~ 44362943 (+) | False | XLOC_015820 |
| TCONS_00031445 | mRNA | upstream | 63668 | 44348473 ~ 44362941 (+) | False | XLOC_015820 |
| TCONS_00031444 | mRNA | upstream | 471199 | 43920461 ~ 43955410 (+) | True | XLOC_015818 |
| TCONS_00031442 | mRNA | upstream | 507735 | 43894368 ~ 43918874 (+) | False | XLOC_015817 |
| TCONS_00031443 | mRNA | upstream | 507897 | 43895103 ~ 43918712 (+) | True | XLOC_015817 |
| TCONS_00031452 | mRNA | downstream | 2495 | 44512324 ~ 44516143 (+) | False | XLOC_015825 |
| TCONS_00031453 | mRNA | downstream | 2560 | 44512389 ~ 44545869 (+) | False | XLOC_015825 |
| TCONS_00031454 | mRNA | downstream | 2566 | 44512395 ~ 44512779 (+) | False | XLOC_015825 |
| TCONS_00031455 | mRNA | downstream | 8807 | 44518636 ~ 44526620 (+) | False | XLOC_015825 |
| TCONS_00031456 | mRNA | downstream | 18426 | 44528255 ~ 44542248 (+) | True | XLOC_015825 |
| TCONS_00031447 | other | upstream | 73042 | 44352673 ~ 44353567 (+) | False | XLOC_015820 |
| TCONS_00031434 | other | upstream | 1123527 | 43279601 ~ 43303082 (+) | True | XLOC_015812 |
| TCONS_00031429 | other | upstream | 1427690 | 42998802 ~ 42998919 (+) | True | XLOC_015810 |
| TCONS_00031414 | other | upstream | 1839574 | 42586738 ~ 42587035 (+) | True | XLOC_015800 |
| TCONS_00031413 | other | upstream | 2002810 | 42423684 ~ 42423799 (+) | True | XLOC_015799 |
| TCONS_00031458 | other | downstream | 54549 | 44564378 ~ 44564494 (+) | True | XLOC_015827 |
| TCONS_00031468 | other | downstream | 413970 | 44923799 ~ 44924676 (+) | True | XLOC_015830 |
| TCONS_00031495 | other | downstream | 1055384 | 45565213 ~ 45565811 (+) | True | XLOC_015853 |
| TCONS_00031505 | other | downstream | 1779031 | 46288860 ~ 46288996 (+) | True | XLOC_015865 |
| TCONS_00031509 | other | downstream | 2602867 | 47112696 ~ 47113654 (+) | True | XLOC_015873 |
