RNA id: TCONS_00031506



Basic Information


Item Value
RNA id TCONS_00031506
length 768
RNA type mRNA
GC content 0.51
exon number 4
gene id XLOC_015866
representative True

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 46411079 ~ 46489869 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


atGACCACCACAACAGAAACATTAATGGACACCAGGACCGCGACAGCAGAGCTCGGCTGGACGGCGTACCCTTCATCagggtgggaGGAAGTAAGCGGCTATGATGAAAACCTCAACACCATCCGAACATACCAGGTGTGCAATGTCTTCGAGTCCAACCAGAACAACTGGCTGCTCACCACATTCATCGCTCGTCGTGGCGCTCAGCGGATCTATGTGGAAATGCGTTTCACTGTCCGAGACTGCAGCAGTATTCCGCGAGTGCCTGGATCCTGTAAGGAGACCTTTAACTTGTACTACTATGAAACGGACTCTGTTATCGCCACCAAGGGTACGGCGTTCTGGATGGAGGCCCCGTATTTAAAAGTGGACACTATTGCTGCGGACGAAAGCTTCTCGCAGGTGGATTTTGGTGGTCGGTTGATGAAAGTGAACACGGAGGTGCGGAGCTTCGGTCCACTTTCGAAAAATGGCTTTTATCTGGCATTTCAGGACTATGGGGCATGCATGTCCCTGCTTTCAGTACGTGTGTTTTATAAGAAATGCCCCAGTGTGGTGCAGAACTTTGCAATCTTTCCAGAGACTATGACTGGAGCAGAGAGCACCTCCCTGGTGATTGCTCGTGGGATGTGCATCCCAAATTCAGAGGAAGTGGATGTACCAATTAAGTTGTACTGTAATGGCGATGGGGACTGGATGGTTCCGATTGGGAGCTGCACATGCAAGGCAGGATTCGAGCCGGACAATGGGAACATCTGTCGAGGATTG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000187016

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033660 lncRNA upstream 78566 46194327 ~ 46332513 (+) False XLOC_015863
TCONS_00033659 lncRNA upstream 78566 46194327 ~ 46332513 (+) True XLOC_015863
TCONS_00033661 lncRNA upstream 93296 46280702 ~ 46317783 (+) False XLOC_015864
TCONS_00033662 lncRNA upstream 98273 46280828 ~ 46312806 (+) True XLOC_015864
TCONS_00033658 lncRNA upstream 351078 46056806 ~ 46060001 (+) True XLOC_015862
TCONS_00033663 lncRNA downstream 277694 46767563 ~ 46814415 (+) False XLOC_015868
TCONS_00033664 lncRNA downstream 277708 46767577 ~ 46814415 (+) False XLOC_015868
TCONS_00033300 lncRNA downstream 286904 46776773 ~ 46813717 (+) False XLOC_015868
TCONS_00033299 lncRNA downstream 286904 46776773 ~ 46813717 (+) True XLOC_015868
TCONS_00033665 lncRNA downstream 340365 46830234 ~ 46842919 (+) False XLOC_015869
TCONS_00031504 mRNA upstream 226489 46032678 ~ 46184590 (+) True XLOC_015861
TCONS_00031503 mRNA upstream 398335 46009507 ~ 46012744 (+) True XLOC_015860
TCONS_00031502 mRNA upstream 489876 45918939 ~ 45921203 (+) True XLOC_015859
TCONS_00031501 mRNA upstream 604712 45696743 ~ 45806367 (+) False XLOC_015858
TCONS_00031500 mRNA upstream 604712 45696743 ~ 45806367 (+) True XLOC_015858
TCONS_00031507 mRNA downstream 99929 46589798 ~ 46728027 (+) False XLOC_015867
TCONS_00031508 mRNA downstream 99951 46589820 ~ 46728000 (+) True XLOC_015867
TCONS_00031511 mRNA downstream 759310 47249179 ~ 47249425 (+) True XLOC_015875
TCONS_00031513 mRNA downstream 981778 47471647 ~ 47516648 (+) False XLOC_015878
TCONS_00031514 mRNA downstream 982074 47471943 ~ 47515390 (+) False XLOC_015878
TCONS_00031505 other upstream 122083 46288860 ~ 46288996 (+) True XLOC_015865
TCONS_00031495 other upstream 845268 45565213 ~ 45565811 (+) True XLOC_015853
TCONS_00031468 other upstream 1486403 44923799 ~ 44924676 (+) True XLOC_015830
TCONS_00031458 other upstream 1846585 44564378 ~ 44564494 (+) True XLOC_015827
TCONS_00031447 other upstream 2057512 44352673 ~ 44353567 (+) False XLOC_015820
TCONS_00031509 other downstream 622827 47112696 ~ 47113654 (+) True XLOC_015873
TCONS_00031510 other downstream 659064 47148933 ~ 47149569 (+) True XLOC_015874
TCONS_00031532 other downstream 1452322 47942191 ~ 47943492 (+) True XLOC_015885
TCONS_00031539 other downstream 1773881 48263750 ~ 48264602 (+) True XLOC_015891
TCONS_00031564 other downstream 3157089 49646958 ~ 49647989 (+) True XLOC_015908

Expression Profile


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