RNA id: TCONS_00031509



Basic Information


Item Value
RNA id TCONS_00031509
length 504
RNA type processed_transcript
GC content 0.21
exon number 2
gene id XLOC_015873
representative True

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47112696 ~ 47113654 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


CTATAAAACTTAACAGTCAAAATCATTAAATACAATAAGTTAGTTTAATTCTTTAAAAGGTTACTTTGACTCAGTGAAAAAGAGTTACTGTAACTCATCAACAGATTAAACTAAGCAGAACTCAAAACAATTgagtaatgaatgaattaattatattttttgtgcTAACTCTAAAACTAGGAGCAATACCAAACCATTTCCGTAGCTATACAGTTGTTTACAGTTAATTTGTTTACAATTTGATGactgaacttaaaatgttcaagttcataatatatataaaatatatatatacaattaaagtcagaattattagccccctttgtttatttatttatttatttatttattttttaatatttcccaaattatgtttaacagagcaaggaaatgttcaccgTATTTTaactctgctTTTTTGTATAACTtcacattttatataatttatataatttatatatatatatatatatatatatatatatatatatatatatatatata

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000144270

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00033676 lncRNA upstream 13132 46986822 ~ 47099564 (+) False XLOC_015872
TCONS_00033307 lncRNA upstream 70237 46943217 ~ 47042459 (+) False XLOC_015872
TCONS_00033672 lncRNA upstream 70237 46943218 ~ 47042459 (+) False XLOC_015872
TCONS_00033306 lncRNA upstream 89927 46943097 ~ 47022769 (+) False XLOC_015872
TCONS_00033671 lncRNA upstream 97674 46943218 ~ 47015022 (+) False XLOC_015872
TCONS_00033308 lncRNA downstream 182335 47295989 ~ 47298098 (+) True XLOC_015876
TCONS_00033309 lncRNA downstream 194555 47308209 ~ 47324328 (+) False XLOC_015877
TCONS_00033310 lncRNA downstream 195525 47309179 ~ 47324328 (+) False XLOC_015877
TCONS_00031512 lncRNA downstream 198923 47312577 ~ 47324379 (+) True XLOC_015877
TCONS_00033678 lncRNA downstream 727917 47841571 ~ 47916972 (+) True XLOC_015882
TCONS_00031507 mRNA upstream 384669 46589798 ~ 46728027 (+) False XLOC_015867
TCONS_00031508 mRNA upstream 384696 46589820 ~ 46728000 (+) True XLOC_015867
TCONS_00031506 mRNA upstream 622827 46411079 ~ 46489869 (+) True XLOC_015866
TCONS_00031504 mRNA upstream 928106 46032678 ~ 46184590 (+) True XLOC_015861
TCONS_00031503 mRNA upstream 1099952 46009507 ~ 46012744 (+) True XLOC_015860
TCONS_00031511 mRNA downstream 135525 47249179 ~ 47249425 (+) True XLOC_015875
TCONS_00031513 mRNA downstream 357993 47471647 ~ 47516648 (+) False XLOC_015878
TCONS_00031514 mRNA downstream 358289 47471943 ~ 47515390 (+) False XLOC_015878
TCONS_00031515 mRNA downstream 376025 47489679 ~ 47515390 (+) True XLOC_015878
TCONS_00031516 mRNA downstream 468343 47581997 ~ 47585197 (+) False XLOC_015879
TCONS_00031505 other upstream 823700 46288860 ~ 46288996 (+) True XLOC_015865
TCONS_00031495 other upstream 1546885 45565213 ~ 45565811 (+) True XLOC_015853
TCONS_00031468 other upstream 2188020 44923799 ~ 44924676 (+) True XLOC_015830
TCONS_00031458 other upstream 2548202 44564378 ~ 44564494 (+) True XLOC_015827
TCONS_00031447 other upstream 2759129 44352673 ~ 44353567 (+) False XLOC_015820
TCONS_00031510 other downstream 35279 47148933 ~ 47149569 (+) True XLOC_015874
TCONS_00031532 other downstream 828537 47942191 ~ 47943492 (+) True XLOC_015885
TCONS_00031539 other downstream 1150096 48263750 ~ 48264602 (+) True XLOC_015891
TCONS_00031564 other downstream 2533304 49646958 ~ 49647989 (+) True XLOC_015908
TCONS_00031572 other downstream 2742092 49855746 ~ 49856793 (+) True XLOC_015912

Expression Profile


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