Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU463536 |
| length | 754 |
| lncRNA type | antisense_over |
| GC content | 0.58 |
| exon number | 2 |
| gene id | G408623 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48163590 ~ 48164373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU463467 | lncRNA | downstream | 17579 | 48063783 ~ 48146011 (-) | True | G408564 |
| TU463501 | lncRNA | downstream | 61021 | 48102108 ~ 48102569 (-) | True | G408591 |
| TU463496 | lncRNA | downstream | 61597 | 48100332 ~ 48101993 (-) | False | G408591 |
| TU463499 | lncRNA | downstream | 62175 | 48100586 ~ 48101415 (-) | False | G408591 |
| TU463462 | lncRNA | downstream | 95519 | 48054088 ~ 48068071 (-) | True | G408560 |
| TU463576 | lncRNA | upstream | 53099 | 48217472 ~ 48218065 (-) | True | G408662 |
| TU463577 | lncRNA | upstream | 53753 | 48218126 ~ 48218459 (-) | True | G408663 |
| TU463581 | lncRNA | upstream | 55901 | 48220274 ~ 48220492 (-) | True | G408666 |
| TU463579 | lncRNA | upstream | 58927 | 48223300 ~ 48226856 (-) | True | G408665 |
| TU463585 | lncRNA | upstream | 65792 | 48230165 ~ 48255834 (-) | True | G408669 |
| XM_021603201.2 | mRNA | downstream | 37912 | 48106327 ~ 48125678 (-) | True | nup54 |
| XM_021603199.2 | mRNA | downstream | 37913 | 48106327 ~ 48125677 (-) | False | nup54 |
| XM_021603202.2 | mRNA | downstream | 37913 | 48106327 ~ 48125677 (-) | False | nup54 |
| XM_021603203.2 | mRNA | downstream | 37913 | 48106327 ~ 48125677 (-) | False | nup54 |
| XM_036977729.1 | mRNA | downstream | 37913 | 48106327 ~ 48125677 (-) | False | nup54 |
| XM_021603215.2 | mRNA | upstream | 260492 | 48424865 ~ 48447883 (-) | False | LOC110523983 |
| XM_021603214.2 | mRNA | upstream | 260492 | 48424865 ~ 48447888 (-) | False | LOC110523983 |
| XM_021603219.2 | mRNA | upstream | 375709 | 48540082 ~ 48544179 (-) | False | pdcl |
| XM_021603220.2 | mRNA | upstream | 375709 | 48540082 ~ 48544179 (-) | False | pdcl |
| XM_021603221.2 | mRNA | upstream | 375709 | 48540082 ~ 48544432 (-) | False | pdcl |
| TU461500 | other | downstream | 1553475 | 46604229 ~ 46610115 (-) | True | LOC110523962 |
| TU461254 | other | downstream | 1929053 | 46219667 ~ 46234537 (-) | True | G406588 |
| TU460699 | other | downstream | 2139750 | 46021154 ~ 46023840 (-) | True | LOC110523950 |
| TU460686 | other | downstream | 2174107 | 45982838 ~ 45989483 (-) | False | G406076 |
| TU460459 | other | downstream | 2550635 | 45612428 ~ 45612955 (-) | True | G405889 |
| TU463578 | other | upstream | 57579 | 48221952 ~ 48223220 (-) | True | G408664 |
| TU463710 | other | upstream | 188929 | 48353302 ~ 48357240 (-) | False | G408782 |
| TU463712 | other | upstream | 189275 | 48353648 ~ 48357240 (-) | False | G408782 |
| TU463709 | other | upstream | 189338 | 48353711 ~ 48357240 (-) | False | G408782 |
| TU463711 | other | upstream | 189338 | 48353711 ~ 48357565 (-) | True | G408782 |
