Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU463596 |
| length | 953 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G408678 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48348200 ~ 48349152 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU463582 | lncRNA | downstream | 68421 | 48256292 ~ 48279779 (-) | True | G408667 |
| TU463585 | lncRNA | downstream | 92366 | 48230165 ~ 48255834 (-) | True | G408669 |
| TU463579 | lncRNA | downstream | 121344 | 48223300 ~ 48226856 (-) | True | G408665 |
| TU463581 | lncRNA | downstream | 127708 | 48220274 ~ 48220492 (-) | True | G408666 |
| TU463577 | lncRNA | downstream | 129741 | 48218126 ~ 48218459 (-) | True | G408663 |
| TU463717 | lncRNA | upstream | 11265 | 48360417 ~ 48360742 (-) | True | G408787 |
| TU463747 | lncRNA | upstream | 47596 | 48396748 ~ 48397100 (-) | True | G408817 |
| TU463750 | lncRNA | upstream | 50870 | 48400022 ~ 48401091 (-) | True | G408820 |
| TU463751 | lncRNA | upstream | 52013 | 48401165 ~ 48401479 (-) | True | G408821 |
| TU463754 | lncRNA | upstream | 62512 | 48411664 ~ 48412145 (-) | True | G408824 |
| XM_021603201.2 | mRNA | downstream | 222522 | 48106327 ~ 48125678 (-) | True | nup54 |
| XM_021603203.2 | mRNA | downstream | 222523 | 48106327 ~ 48125677 (-) | False | nup54 |
| XM_021603215.2 | mRNA | upstream | 75713 | 48424865 ~ 48447883 (-) | False | LOC110523983 |
| XM_021603214.2 | mRNA | upstream | 75713 | 48424865 ~ 48447888 (-) | False | LOC110523983 |
| XM_021603219.2 | mRNA | upstream | 190930 | 48540082 ~ 48544179 (-) | False | pdcl |
| XM_021603220.2 | mRNA | upstream | 190930 | 48540082 ~ 48544179 (-) | False | pdcl |
| XM_021603221.2 | mRNA | upstream | 190930 | 48540082 ~ 48544432 (-) | False | pdcl |
| TU463578 | other | downstream | 124980 | 48221952 ~ 48223220 (-) | True | G408664 |
| TU461500 | other | downstream | 1738085 | 46604229 ~ 46610115 (-) | True | LOC110523962 |
| TU461254 | other | downstream | 2113663 | 46219667 ~ 46234537 (-) | True | G406588 |
| TU460699 | other | downstream | 2324360 | 46021154 ~ 46023840 (-) | True | LOC110523950 |
| TU460686 | other | downstream | 2358717 | 45982838 ~ 45989483 (-) | False | G406076 |
| TU463710 | other | upstream | 4150 | 48353302 ~ 48357240 (-) | False | G408782 |
| TU463712 | other | upstream | 4496 | 48353648 ~ 48357240 (-) | False | G408782 |
| TU463709 | other | upstream | 4559 | 48353711 ~ 48357240 (-) | False | G408782 |
| TU463711 | other | upstream | 4559 | 48353711 ~ 48357565 (-) | True | G408782 |
| TU465237 | other | upstream | 1184764 | 49533916 ~ 49576456 (-) | True | G410168 |
