Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU463870 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G408912 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 48585427 ~ 48585672 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU463849 | lncRNA | downstream | 32228 | 48552887 ~ 48553199 (-) | True | G408895 |
| TU463848 | lncRNA | downstream | 32959 | 48552224 ~ 48552468 (-) | True | G408894 |
| TU463845 | lncRNA | downstream | 40062 | 48545069 ~ 48545365 (-) | True | G408891 |
| TU463807 | lncRNA | downstream | 48387 | 48532422 ~ 48537040 (-) | False | G408856 |
| TU463872 | lncRNA | upstream | 850 | 48586522 ~ 48586734 (-) | True | G408914 |
| TU463874 | lncRNA | upstream | 1787 | 48587459 ~ 48587782 (-) | True | G408916 |
| TU464230 | lncRNA | upstream | 19981 | 48605653 ~ 48606623 (-) | False | G409219 |
| TU464231 | lncRNA | upstream | 19981 | 48605653 ~ 48606352 (-) | False | G409219 |
| TU464232 | lncRNA | upstream | 19981 | 48605653 ~ 48606509 (-) | True | G409219 |
| XM_021603223.2 | mRNA | downstream | 4764 | 48574750 ~ 48580663 (-) | True | pdxp |
| XM_021603221.2 | mRNA | downstream | 40995 | 48540082 ~ 48544432 (-) | False | pdcl |
| XM_036977745.1 | mRNA | downstream | 40995 | 48540082 ~ 48544432 (-) | True | pdcl |
| XM_021603219.2 | mRNA | downstream | 41248 | 48540082 ~ 48544179 (-) | False | pdcl |
| XM_021603220.2 | mRNA | downstream | 41248 | 48540082 ~ 48544179 (-) | False | pdcl |
| XM_021603231.2 | mRNA | upstream | 61234 | 48646906 ~ 48693022 (-) | False | mier3a |
| XM_036977749.1 | mRNA | upstream | 61234 | 48646906 ~ 48693022 (-) | False | mier3a |
| XM_036977750.1 | mRNA | upstream | 61234 | 48646906 ~ 48693022 (-) | False | mier3a |
| XM_036977751.1 | mRNA | upstream | 61234 | 48646906 ~ 48693022 (-) | True | mier3a |
| XM_021603234.2 | mRNA | upstream | 144311 | 48729983 ~ 48847550 (-) | False | LOC110523989 |
| TU463711 | other | downstream | 227862 | 48353711 ~ 48357565 (-) | True | G408782 |
| TU463710 | other | downstream | 228187 | 48353302 ~ 48357240 (-) | False | G408782 |
| TU463712 | other | downstream | 228187 | 48353648 ~ 48357240 (-) | False | G408782 |
| TU463709 | other | downstream | 228187 | 48353711 ~ 48357240 (-) | False | G408782 |
| TU463578 | other | downstream | 362207 | 48221952 ~ 48223220 (-) | True | G408664 |
| TU465237 | other | upstream | 948244 | 49533916 ~ 49576456 (-) | True | G410168 |
| TU466579 | other | upstream | 2033219 | 50618891 ~ 50619175 (-) | True | G411459 |
| TU467085 | other | upstream | 2136642 | 50722314 ~ 50723061 (-) | True | G411929 |
| TU467086 | other | upstream | 2137487 | 50723159 ~ 50724077 (-) | True | G411930 |
| TU467428 | other | upstream | 2594086 | 51179758 ~ 51184775 (-) | False | LOC110524003 |
