Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU464956 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G409909 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 49022613 ~ 49022850 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU464460 | lncRNA | downstream | 24504 | 48997899 ~ 48998109 (-) | True | G409433 |
| TU464451 | lncRNA | downstream | 30836 | 48991552 ~ 48991777 (-) | True | G409424 |
| TU464445 | lncRNA | downstream | 35558 | 48986802 ~ 48987055 (-) | True | G409418 |
| TU464327 | lncRNA | downstream | 225907 | 48788932 ~ 48796706 (-) | True | G409308 |
| TU464324 | lncRNA | downstream | 228970 | 48786069 ~ 48793643 (-) | True | G409306 |
| TU464961 | lncRNA | upstream | 5812 | 49028662 ~ 49028942 (-) | True | G409914 |
| TU464971 | lncRNA | upstream | 30640 | 49053490 ~ 49053893 (-) | True | G409924 |
| TU465072 | lncRNA | upstream | 153418 | 49176268 ~ 49194298 (-) | False | G410006 |
| TU465070 | lncRNA | upstream | 169051 | 49191901 ~ 49194298 (-) | False | G410006 |
| TU465068 | lncRNA | upstream | 190012 | 49212862 ~ 49214687 (-) | True | G410006 |
| XM_036976507.1 | mRNA | downstream | 67744 | 48889781 ~ 48954869 (-) | True | notch1 |
| NM_001135695.1 | mRNA | downstream | 67792 | 48881393 ~ 48954821 (-) | False | notch1 |
| XM_036976505.1 | mRNA | downstream | 107206 | 48882462 ~ 48915407 (-) | False | notch1 |
| XM_021603235.2 | mRNA | downstream | 175063 | 48729983 ~ 48847550 (-) | False | LOC110523989 |
| XM_036977752.1 | mRNA | upstream | 65685 | 49088535 ~ 49370988 (-) | True | col27a1a |
| XM_021603239.2 | mRNA | upstream | 635136 | 49657986 ~ 49663582 (-) | True | LOC110523994 |
| XM_021601323.2 | mRNA | upstream | 1122128 | 50144978 ~ 50150252 (-) | True | LOC110522869 |
| XR_005051756.1 | mRNA | upstream | 1407870 | 50430720 ~ 50468722 (-) | False | LOC118964617 |
| XR_005051755.1 | mRNA | upstream | 1407870 | 50430720 ~ 50468752 (-) | False | LOC118964617 |
| TU463711 | other | downstream | 665048 | 48353711 ~ 48357565 (-) | True | G408782 |
| TU463710 | other | downstream | 665373 | 48353302 ~ 48357240 (-) | False | G408782 |
| TU463712 | other | downstream | 665373 | 48353648 ~ 48357240 (-) | False | G408782 |
| TU463709 | other | downstream | 665373 | 48353711 ~ 48357240 (-) | False | G408782 |
| TU463578 | other | downstream | 799393 | 48221952 ~ 48223220 (-) | True | G408664 |
| TU465237 | other | upstream | 511066 | 49533916 ~ 49576456 (-) | True | G410168 |
| TU466579 | other | upstream | 1596041 | 50618891 ~ 50619175 (-) | True | G411459 |
| TU467085 | other | upstream | 1699464 | 50722314 ~ 50723061 (-) | True | G411929 |
| TU467086 | other | upstream | 1700309 | 50723159 ~ 50724077 (-) | True | G411930 |
| TU467428 | other | upstream | 2156908 | 51179758 ~ 51184775 (-) | False | LOC110524003 |
