Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU465285 |
| length | 393 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G410214 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 49500209 ~ 49500664 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU465068 | lncRNA | downstream | 285522 | 49212862 ~ 49214687 (-) | True | G410006 |
| TU465072 | lncRNA | downstream | 305911 | 49176268 ~ 49194298 (-) | False | G410006 |
| TU465070 | lncRNA | downstream | 305911 | 49191901 ~ 49194298 (-) | False | G410006 |
| TU464971 | lncRNA | downstream | 446316 | 49053490 ~ 49053893 (-) | True | G409924 |
| TU464961 | lncRNA | downstream | 471267 | 49028662 ~ 49028942 (-) | True | G409914 |
| TU465288 | lncRNA | upstream | 5123 | 49505787 ~ 49508334 (-) | True | G410217 |
| TU465343 | lncRNA | upstream | 116175 | 49616839 ~ 49617041 (-) | True | G410272 |
| TU465412 | lncRNA | upstream | 233330 | 49733994 ~ 49734201 (-) | True | G410336 |
| TU465415 | lncRNA | upstream | 235824 | 49736488 ~ 49736763 (-) | True | G410339 |
| TU465746 | lncRNA | upstream | 349340 | 49850004 ~ 49852736 (-) | True | G410658 |
| XM_036977752.1 | mRNA | downstream | 129221 | 49088535 ~ 49370988 (-) | True | col27a1a |
| XM_036976507.1 | mRNA | downstream | 545340 | 48889781 ~ 48954869 (-) | True | notch1 |
| NM_001135695.1 | mRNA | downstream | 545388 | 48881393 ~ 48954821 (-) | False | notch1 |
| XM_036976505.1 | mRNA | downstream | 584802 | 48882462 ~ 48915407 (-) | False | notch1 |
| XM_021603235.2 | mRNA | downstream | 652659 | 48729983 ~ 48847550 (-) | False | LOC110523989 |
| XM_021603239.2 | mRNA | upstream | 157322 | 49657986 ~ 49663582 (-) | True | LOC110523994 |
| XM_021601323.2 | mRNA | upstream | 644314 | 50144978 ~ 50150252 (-) | True | LOC110522869 |
| XR_005051756.1 | mRNA | upstream | 930056 | 50430720 ~ 50468722 (-) | False | LOC118964617 |
| XR_005051755.1 | mRNA | upstream | 930056 | 50430720 ~ 50468752 (-) | False | LOC118964617 |
| XM_021603243.2 | mRNA | upstream | 1324945 | 50825609 ~ 50987810 (-) | False | LOC110523998 |
| TU463711 | other | downstream | 1142644 | 48353711 ~ 48357565 (-) | True | G408782 |
| TU463710 | other | downstream | 1142969 | 48353302 ~ 48357240 (-) | False | G408782 |
| TU463712 | other | downstream | 1142969 | 48353648 ~ 48357240 (-) | False | G408782 |
| TU463709 | other | downstream | 1142969 | 48353711 ~ 48357240 (-) | False | G408782 |
| TU463578 | other | downstream | 1276989 | 48221952 ~ 48223220 (-) | True | G408664 |
| TU465237 | other | upstream | 33252 | 49533916 ~ 49576456 (-) | True | G410168 |
| TU466579 | other | upstream | 1118227 | 50618891 ~ 50619175 (-) | True | G411459 |
| TU467085 | other | upstream | 1221650 | 50722314 ~ 50723061 (-) | True | G411929 |
| TU467086 | other | upstream | 1222495 | 50723159 ~ 50724077 (-) | True | G411930 |
| TU467428 | other | upstream | 1679094 | 51179758 ~ 51184775 (-) | False | LOC110524003 |
