RNA id: TU467355


Basic Information

Item Value
RNA id TU467355
length 208
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G412181
representative True

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51045003 ~ 51045210 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CGTGGAAAGAGATCaggatgccttgtgaggatcagccGAAGAGTGGCTAATCTTCCCTTGCCTTTCgttctgctagctaacgttcaattgcaggaaaataaatgggatgaactgaaagcacgtatatactaccaacaggacattaaaaactgtaatatcttatgtttcactgagtcgtggctgaactacgacattaagaacatacacc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU467324 lncRNA downstream 46246 50998179 ~ 50998757 (-) True G412151
TU467322 lncRNA downstream 47812 50996864 ~ 50997191 (-) True G412149
TU467319 lncRNA downstream 49481 50995096 ~ 50995522 (-) True G412146
TU467318 lncRNA downstream 50365 50994166 ~ 50994638 (-) True G412145
TU467182 lncRNA downstream 56495 50986603 ~ 50988508 (-) True G412011
TU467358 lncRNA upstream 3352 51048562 ~ 51048779 (-) True G412184
TU467415 lncRNA upstream 94389 51139599 ~ 51149659 (-) True G412240
TU467430 lncRNA upstream 134548 51179758 ~ 51228505 (-) True LOC110524003
TU467475 lncRNA upstream 218239 51263449 ~ 51263702 (-) True G412295
TU467554 lncRNA upstream 244767 51289977 ~ 51335248 (-) True G412365
XM_021603252.2 mRNA downstream 5718 50987889 ~ 51039285 (-) False kif14
XM_021603253.2 mRNA downstream 5718 50987889 ~ 51039285 (-) True kif14
XM_021603243.2 mRNA downstream 57193 50825609 ~ 50987810 (-) False LOC110523998
XM_021603259.2 mRNA upstream 107070 51152280 ~ 51173859 (-) False LOC110524002
XM_021603260.2 mRNA upstream 107070 51152280 ~ 51173859 (-) False LOC110524002
XM_021603261.2 mRNA upstream 107070 51152280 ~ 51173859 (-) False LOC110524002
XM_021603262.2 mRNA upstream 107070 51152280 ~ 51173860 (-) False LOC110524002
XM_021603264.2 mRNA upstream 107070 51152280 ~ 51173860 (-) False LOC110524002
TU467086 other downstream 320926 50723159 ~ 50724077 (-) True G411930
TU467085 other downstream 321942 50722314 ~ 50723061 (-) True G411929
TU466579 other downstream 425828 50618891 ~ 50619175 (-) True G411459
TU465237 other downstream 1468547 49533916 ~ 49576456 (-) True G410168
TU463711 other downstream 2687438 48353711 ~ 48357565 (-) True G408782
TU467428 other upstream 134548 51179758 ~ 51184775 (-) False LOC110524003
TU467562 other upstream 328255 51373465 ~ 51377130 (-) True G412372
TU467825 other upstream 513168 51558378 ~ 51612562 (-) True G412613
TU470637 other upstream 2572473 53617683 ~ 53618759 (-) False G415256
TU470639 other upstream 2572528 53617738 ~ 53618864 (-) True G415256

Expression Profile