RNA id: TU467843


Basic Information

Item Value
RNA id TU467843
length 681
lncRNA type inter_gene
GC content 0.16
exon number 3
gene id G412623
representative False

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 51595824 ~ 51606490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

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Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU467775 lncRNA downstream 69072 51469541 ~ 51526752 (-) True G412563
TU467640 lncRNA downstream 178328 51417137 ~ 51417496 (-) True G412445
TU467629 lncRNA downstream 185709 51409680 ~ 51410115 (-) True G412435
TU467627 lncRNA downstream 186281 51409303 ~ 51409543 (-) True G412433
TU467626 lncRNA downstream 188370 51407172 ~ 51407454 (-) True G412432
TU467850 lncRNA upstream 9779 51612729 ~ 51616333 (-) True G412630
TU467853 lncRNA upstream 13452 51616402 ~ 51616797 (-) True G412632
TU467854 lncRNA upstream 13882 51616832 ~ 51617123 (-) True G412633
TU467858 lncRNA upstream 17436 51620386 ~ 51620676 (-) True G412637
TU467929 lncRNA upstream 24246 51627196 ~ 51670347 (-) True G412706
XM_021603269.2 mRNA downstream 213073 51296717 ~ 51382751 (-) True LOC110524005
XM_021603271.2 mRNA downstream 213304 51296717 ~ 51382520 (-) False LOC110524005
XM_021603270.2 mRNA downstream 213676 51296717 ~ 51382148 (-) False LOC110524005
XM_036977760.1 mRNA downstream 370007 51222516 ~ 51225817 (-) False LOC110524003
XM_036979048.1 mRNA upstream 30347 51633297 ~ 51768111 (-) True LOC110522962
XM_036977770.1 mRNA upstream 437458 52040408 ~ 52100583 (-) False LOC110522967
XM_036977766.1 mRNA upstream 437458 52040408 ~ 52100611 (-) False LOC110522967
XM_036977767.1 mRNA upstream 437458 52040408 ~ 52100611 (-) False LOC110522967
XM_036977768.1 mRNA upstream 437458 52040408 ~ 52100611 (-) False LOC110522967
TU467562 other downstream 218694 51373465 ~ 51377130 (-) True G412372
TU467428 other downstream 411049 51179758 ~ 51184775 (-) False LOC110524003
TU467086 other downstream 871747 50723159 ~ 50724077 (-) True G411930
TU467085 other downstream 872763 50722314 ~ 50723061 (-) True G411929
TU466579 other downstream 976649 50618891 ~ 50619175 (-) True G411459
TU470637 other upstream 2014733 53617683 ~ 53618759 (-) False G415256
TU470639 other upstream 2014788 53617738 ~ 53618864 (-) True G415256
TU470822 other upstream 2287810 53890760 ~ 53892906 (-) True G415420
TU470869 other upstream 2400781 54003731 ~ 54005673 (-) True G415464
TU471641 other upstream 2760336 54363286 ~ 54386228 (-) False G416110

Expression Profile