Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU471638 |
| length | 445 |
| lncRNA type | antisense_over |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G416107 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 54351930 ~ 54352374 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
54,351,200
54,351,600
54,352,000
54,352,400
54,352,800
54,353,200
54,353,600
54,354,000
54,354,400
54,354,800
54,355,200
54,355,600
NC_048569.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU471637 | lncRNA | downstream | 241 | 54351288 ~ 54351689 (-) | True | G416106 |
| TU471628 | lncRNA | downstream | 13621 | 54338100 ~ 54338309 (-) | True | G416100 |
| TU471623 | lncRNA | downstream | 21229 | 54330351 ~ 54330701 (-) | True | G416095 |
| TU471621 | lncRNA | downstream | 23941 | 54326256 ~ 54327989 (-) | True | LOC110524048 |
| TU471618 | lncRNA | downstream | 24344 | 54326256 ~ 54327586 (-) | False | LOC110524048 |
| TU471643 | lncRNA | upstream | 3148 | 54355522 ~ 54356155 (-) | True | G416111 |
| TU471642 | lncRNA | upstream | 10912 | 54363286 ~ 54392411 (-) | True | G416110 |
| TU471655 | lncRNA | upstream | 25309 | 54377683 ~ 54381094 (-) | False | G416123 |
| TU471656 | lncRNA | upstream | 25309 | 54377683 ~ 54381094 (-) | False | G416123 |
| TU471657 | lncRNA | upstream | 25309 | 54377683 ~ 54381094 (-) | False | G416123 |
| XR_005051760.1 | mRNA | downstream | 24222 | 54326233 ~ 54327708 (-) | False | LOC110524048 |
| XR_002473530.2 | mRNA | downstream | 24224 | 54326233 ~ 54327706 (-) | False | LOC110524048 |
| XR_005051759.1 | mRNA | downstream | 24227 | 54326233 ~ 54327703 (-) | False | LOC110524048 |
| XM_021603345.2 | mRNA | downstream | 32461 | 54310588 ~ 54319469 (-) | True | LOC110524047 |
| XM_021603346.2 | mRNA | downstream | 34984 | 54310588 ~ 54316946 (-) | False | LOC110524047 |
| XM_021603348.2 | mRNA | upstream | 25749 | 54378123 ~ 54543803 (-) | False | LOC110524050 |
| XM_021603349.2 | mRNA | upstream | 25749 | 54378123 ~ 54543804 (-) | True | LOC110524050 |
| XM_036977848.1 | mRNA | upstream | 202677 | 54555051 ~ 54587190 (-) | False | ssbp3b |
| XM_036977849.1 | mRNA | upstream | 202677 | 54555051 ~ 54587190 (-) | False | ssbp3b |
| XM_036977850.1 | mRNA | upstream | 202677 | 54555051 ~ 54587190 (-) | False | ssbp3b |
| TU470869 | other | downstream | 346257 | 54003731 ~ 54005673 (-) | True | G415464 |
| TU470822 | other | downstream | 459024 | 53890760 ~ 53892906 (-) | True | G415420 |
| TU470639 | other | downstream | 733066 | 53617738 ~ 53618864 (-) | True | G415256 |
| TU470637 | other | downstream | 733171 | 53617683 ~ 53618759 (-) | False | G415256 |
| TU467825 | other | downstream | 2739368 | 51558378 ~ 51612562 (-) | True | G412613 |
| TU471641 | other | upstream | 10912 | 54363286 ~ 54386228 (-) | False | G416110 |
| TU472396 | other | upstream | 788941 | 55141315 ~ 55160267 (-) | True | LOC110524071 |
| TU473281 | other | upstream | 1256461 | 55608835 ~ 55609730 (-) | True | G417527 |
| TU474559 | other | upstream | 2356424 | 56708798 ~ 56709840 (-) | False | LOC110522975 |
| TU474560 | other | upstream | 2357906 | 56710280 ~ 56711384 (-) | True | LOC110522975 |
