Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU472008 |
| length | 450 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G416419 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 54850233 ~ 54850682 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU472006 | lncRNA | downstream | 245 | 54847358 ~ 54849988 (-) | True | G416418 |
| TU472005 | lncRNA | downstream | 3687 | 54846084 ~ 54846546 (-) | True | G416417 |
| TU471996 | lncRNA | downstream | 13517 | 54835216 ~ 54836716 (-) | True | G416408 |
| TU471997 | lncRNA | downstream | 16295 | 54832468 ~ 54833938 (-) | True | G416409 |
| TU471826 | lncRNA | downstream | 185606 | 54656773 ~ 54664627 (-) | True | G416253 |
| TU472017 | lncRNA | upstream | 18986 | 54869668 ~ 54870186 (-) | True | G416428 |
| TU472016 | lncRNA | upstream | 23320 | 54874002 ~ 54876338 (-) | True | G416427 |
| TU472021 | lncRNA | upstream | 25774 | 54876456 ~ 54876692 (-) | True | G416432 |
| TU472085 | lncRNA | upstream | 36829 | 54887511 ~ 54888514 (-) | False | G416481 |
| TU472082 | lncRNA | upstream | 36864 | 54887546 ~ 54888514 (-) | False | G416481 |
| XM_021603365.2 | mRNA | downstream | 79947 | 54717326 ~ 54770286 (-) | False | slc44a5b |
| XM_036977856.1 | mRNA | downstream | 79947 | 54717326 ~ 54770286 (-) | False | slc44a5b |
| XM_036977855.1 | mRNA | downstream | 79947 | 54719507 ~ 54770286 (-) | True | slc44a5b |
| XM_021603366.2 | mRNA | downstream | 79948 | 54719507 ~ 54770285 (-) | False | slc44a5b |
| XM_021603359.2 | mRNA | downstream | 188379 | 54640281 ~ 54661854 (-) | True | erich3 |
| XM_021603376.2 | mRNA | upstream | 48414 | 54899096 ~ 54924751 (-) | False | LOC110524065 |
| XM_036977860.1 | mRNA | upstream | 48414 | 54899096 ~ 54924752 (-) | True | LOC110524065 |
| XR_005051585.1 | mRNA | upstream | 147004 | 54997686 ~ 55005447 (-) | True | LOC118964528 |
| XM_021603380.2 | mRNA | upstream | 201042 | 55051724 ~ 55071938 (-) | True | LOC110524068 |
| XM_021603381.2 | mRNA | upstream | 221403 | 55072085 ~ 55073951 (-) | False | LOC110524069 |
| TU471641 | other | downstream | 464005 | 54363286 ~ 54386228 (-) | False | G416110 |
| TU470869 | other | downstream | 844560 | 54003731 ~ 54005673 (-) | True | G415464 |
| TU470822 | other | downstream | 957327 | 53890760 ~ 53892906 (-) | True | G415420 |
| TU470639 | other | downstream | 1231369 | 53617738 ~ 53618864 (-) | True | G415256 |
| TU470637 | other | downstream | 1231474 | 53617683 ~ 53618759 (-) | False | G415256 |
| TU472396 | other | upstream | 290633 | 55141315 ~ 55160267 (-) | True | LOC110524071 |
| TU473281 | other | upstream | 758153 | 55608835 ~ 55609730 (-) | True | G417527 |
| TU474559 | other | upstream | 1858116 | 56708798 ~ 56709840 (-) | False | LOC110522975 |
| TU474560 | other | upstream | 1859598 | 56710280 ~ 56711384 (-) | True | LOC110522975 |
| TU474707 | other | upstream | 1983344 | 56834026 ~ 56834595 (-) | True | G418830 |
